Cyclopterus lumpus (lumpfish): 117742998
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Entry
117742998 CDS
T09199
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117742998
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117742998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_D3
THSD1_N
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
117742998
NCBI-ProteinID:
XP_034406601
LinkDB
All DBs
Position
14
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AA seq
952 aa
AA seq
DB search
MPQAVSLLPFLLALMGYAFAGLNIWPSFHVALSNASVFVDFSTKSNSSTIRNTSLSLINT
ETNTTLLTRTISDIQSAGRVEFNCSCFLYAGTFRFLLKQTSITAASHANDTQDISAQSTT
WWWSSELQVQWPTFHIAVERAGNHSGSFQVGIATNEHFQACSRGIDAALFLEVSYIEYNQ
IGRISIDKVQARTRHPIKPLRSQSVELSCAFPFTERDFIRVALRSPHEAQDVKSSGPLYL
SRIFSYKLLVENTNAYRSGCEGTMTVKLITPPCAHINGKVLLYKDAGATRGIAVSPGMEA
GETALMGLGPEEPSSPPLAFNWLTQGENETEFNCSVFYTGRNKYCFRFVLNFSRSPSPAQ
TCLVVHRSAESWGSWLPWSVCSVSCGEGVRERVRECLLPSGVGGMQCTGMVKEQSLCSLE
DCVVLPTPSPSLTPGAVGLAPLGGNMVVVAGISLCLAVILATVLVTLWRKLCKTPQCSSV
RRGSMHSPGGRKLSDEASIFGHSLQRPSLSDGHGQPGGIAVGVAQKDRPSLGQLLSQTPV
IPLSQDPERLSPTGQKMMPPIFGYHLAQQQLKEMKKKGLKEATQMYHVSSSPVHDTVLGT
SASPTNSSIPTPSGFAHPTLSVGLQEDTNYNHFQIATPFSELPLQTSRFTPDRLSPRVEL
VLGPSARASGGSSKWRDRTADWVEMVERSGFAGLRGGGVDAGKANSFNTNPNFRRTSSFN
DTKPQPRSSGHCRPFRERSLTQVGSRTLPEGSCWNKAGRQPYSSYPIPEHGALEWAKSRP
QINYQRQPWIETASPSYNNELKHIGTKTNSISASAKHADAEVSGSQDRQRSGEAGGGEGI
SGIGGPAARPASLSVDRAERAEQNWNRRGPSPIQRNILARKLKDAQSYSGVKGRQRSSTF
SVSASEQRKGRCHSLPMSGGYGSSGVPPYRLSEAEQRMLDLDLSSAYVGEEV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgtctcactgctgccctttctgctggcactcatgggatatgcttttgca
gggctcaatatctggccctccttccacgttgcccttagcaacgccagtgtatttgtggac
ttcagcacaaaatccaacagcagcaccatccgcaatacaagcctttctctgatcaacacg
gaaaccaacaccacccttctgaccaggaccatctccgacatccaatcggccggtagggtg
gagttcaactgttcttgcttcctgtatgcaggaactttccggttcctgctgaagcagacc
agcatcactgctgcttctcatgctaatgacacacaggacattagcgcacagagcactacc
tggtggtggagctcagagctgcaggtgcagtggcccacctttcacatcgctgtggaaagg
gccggaaaccactcaggatcatttcaggttgggatagccactaatgaacactttcaggcg
tgctccaggggcattgacgcggctctcttcttggaagtcagctacatagagtacaaccag
atagggcgaatcagcatcgacaaggtccaagcccgcacacgacacccaatcaaacccctc
cgttcccagagtgtcgagctgtcctgcgccttccccttcacagaaagagacttcatacga
gtggctttacggtctcctcatgaagcacaggatgtgaagagctctgggccgctgtacctg
tcccgcatcttctcctataagctgctggtggaaaataccaacgcttacaggagtggttgc
gaaggaactatgactgttaaactgataactccaccgtgtgctcacatcaatgggaaggtt
ttactgtataaggatgcaggtgctacgagagggattgcagtttcacctgggatggaagca
ggtgaaacagcactgatggggttgggaccagaggagccctcttcacccccgttggccttt
aactggctgacccagggagagaacgagacagaattcaactgttctgtgttttacactgga
aggaacaagtactgctttcgctttgttctcaacttcagtcgctccccgagtcctgcacag
acctgtttggtggttcacagaagtgcagagtcatggggctcatggctgccctggagtgtg
tgcagtgtgagctgtggagagggggtgagggaacgagtgcgtgagtgtttgctgccctca
ggtgtgggagggatgcagtgtactggcatggtgaaggaacagtccctctgctcgctggag
gactgtgtcgtgttgcccactccttctccatccctcacccctggggctgtcggacttgcc
cctctgggtggtaacatggtcgtggtggctggtatctccctctgcctggctgtgattctg
gctacggttctggtgactttgtggagaaagctttgcaagacccctcagtgcagctctgta
cgcagaggctccatgcattcccctggagggcgcaagctctctgatgaggcgtccattttt
ggccacagcctccaaagacccagcctgtctgacggccatggccaaccggggggcatagct
gtgggtgtagcccagaaagacaggccttccctgggtcagcttctctcacagaccccggtg
attcctctctcacaggacccagaaaggctgtcccctacaggtcagaagatgatgccacca
atatttgggtaccatttggctcagcagcagttgaaagaaatgaagaagaaagggttaaag
gaggcaacacagatgtaccatgtctcttcaagcccagtccatgacactgtgttagggaca
tctgcttcacccacaaactcctccattcctacaccaagtggatttgctcatcccacactc
tccgtgggcctccaggaagacactaactacaatcattttcagattgcaactcccttttct
gagttgccattgcagacttctaggttcacgccggacagactgagtcccagagtggagctt
gtcttgggtccttctgctcgtgcaagtgggggcagctcaaaatggcgtgaccgcactgct
gactgggtggagatggtagagagaagtgggtttgcaggtctcagaggaggaggagtagat
gcagggaaggcaaactcctttaatacaaatccaaatttccgccggacctccagttttaat
gacaccaaaccccaacctcgatcctctggacactgcagaccgtttagagaaaggagtctg
acccaggttggatctcggacccttcctgaaggaagttgttggaataaagcaggacggcag
ccatacagctcttaccccattccagagcacggggccctagagtgggctaaatccagaccc
cagataaattaccagaggcagccttggatagagacagcttctccttcttacaacaatgaa
ctcaaacacataggaaccaaaaccaacagcatttcagcatcagcgaaacatgcggatgca
gaagtcagtggctctcaggataggcaaaggagtggtgaggcaggaggtggagagggaatc
tcagggatcgggggtccagccgcgaggcctgccagcctgagtgtggatcgggcagagcgt
gctgagcagaactggaaccgtcgtgggccatcgcctatccagaggaacatcctggcccgg
aaattaaaggacgctcagtcgtactccggggtcaaggggcggcagcgcagctccaccttc
agtgtatcggcctcggagcagaggaaaggtcgctgccactctctgcccatgtctggaggt
tatggcagcagtggtgtccccccctacaggctgagtgaggcagagcagaggatgttggac
ctagatctgtcctcagcatatgtgggcgaagaggtgtag
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