Cyclopterus lumpus (lumpfish): 117743011
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Entry
117743011 CDS
T09199
Symbol
robo3
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 3
KO
K06755
roundabout, axon guidance receptor 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117743011 (robo3)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
ROBO family
117743011 (robo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
C2-set_3
Sp38
fn3_4
Motif
Other DBs
NCBI-GeneID:
117743011
NCBI-ProteinID:
XP_034406620
Ensembl:
ENSCLMG00005013506
LinkDB
All DBs
Position
14:complement(22826182..22907089)
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AA seq
1405 aa
AA seq
DB search
MEYTAVPLLLLCALTTLAYGSRPRLEDASPRVVEHPSDLIVSKGEPATLNCKAEGRPTPM
VEWYKDGERVETDREDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEAVS
RNASLEVAILRDDFRQTPSDVVVAAGEPAVMECIPPRGHPEPTISWKRNNIRVNDRDERI
TMRGGKLMISNSRKSDAGMYVCVGTNMVGEKDSDPAELVVFERPVFTRQPVNQVVLADDT
VDFFCEVHGDPTPTVRWRREEGELPRARFEIRSDNSLRLTQVRGEDEGTYTCVSENSVGK
AESSGTLQVHVGPSMPPQIVVRPRDQITAPSRTVTFLCGTKGNPPPAVFWQKEGSQILLF
PIQEPSQSGRFSVSLSGELTITDVQVEDSGYYICQAISVAGSILTKALLEVESAPSDRLP
PIIRQGPANHTLVPGSTAQLHCHIMGNPMPSIQWEKDGQRILGNDGRISLMDNGTFQITH
LQETDSGVYTCLASSSSGETSWSGVLTVKESADPWVAQATEPFQLPGPPHKPIVTDVSKN
SVSLTWQPNAHEGGAAVTSYIIEAFSQSAGSTWQTVADMVKMETHTITGLLPNTIYLFIV
RAVNAYGLSDPSPISEPVRTQDVSPTGQGVDHRQVQRELGEVAVQLQEPATLTTASIRVS
WTVDRQSQYVQGYRLFYRPNGGTWLLQDINSPSERVTVLTSLLKGTEYEMKIRPYFDEFQ
GKDSRTLLVRTPEEVPGAPPRAVTVVTVNLSNSSSISVSWEPPPSEMQNGIIQEYRVWCV
GSGGSDNQTHYFINRTVGGNTLSAALKGLMPGVLYQVEVAAVTSAGIGTRSQPVSVLIKL
PAEQPSAPGSGGGGGSSNGGEESSVSLAEQITDVVKQPAFIAGIGGACWVILMGFSVWIY
CRRKKRKELSHYTASFAYTPAVGFPHGEGTVLNGRPGVLGGNMGNYPWLADSWPTTNLVH
SGKEAVTCCTSNHDTAERYYNDAGISNYLNQTEKYSMGGSTEGPIYSTIDATNEDLNSFA
YAQHASTAPYASTSIMPFTNQMQAPAHSGEQPEDGHWIGPPGLSGAQYAQPDRCIGSKPK
QKAMGKAVKTPSLTWMEALPPPPPVGELDDQPPEHEDMDIGSDEEWCPPLPERTYLMEGC
EDEPSPPQRKAASSPATSYSHQSTATLTPSPHEESRAPHDLPRHNHADGQQLSRRRLPCG
PVPVPQAPSPLLTQSNPNLSGQQHHGSAEAGTLQSQSPAHRCLRSQGPVLEEDASSTTTP
VHSRSSPADACTPPNQKSRVKKKVSKTSAYRRDAQGDLPPPPEPPPGEDRLRGPQGCMEA
GNAVNGALSSLERSEYSSSSSSHQRKGSGQRHTDNEEMVAYSSKAGHLSRSQMSSNCSTT
GSSSSRGSTGSRGINSARKHNEDMR
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggagtacacggcggttcccctcctgctgttatgtgctctcaccactttggcatatgga
tcccggcccaggttagaggatgcgtctccccgggtcgtagagcacccgtctgatctgatc
gtgtccaagggcgagccggccaccctcaactgtaaggcagagggacggccgactccaatg
gtggaatggtacaaagacggggagcgcgtggagacggaccgcgaggaccctcggtcccac
cggatgctcttacccagcggctccctcttcttcctgcgaatcgtacacggcaggcggagc
aaacccgacgaaggcgtctacgtgtgcgtggcacgcaactacctgggcgaagcggtcagt
cgcaatgcatcactggaggtggcaattctgagagacgacttccgtcagacgcccagtgat
gtggtggtagcagcaggtgagccggctgtcatggagtgcatcccccccagaggccaccct
gagcccaccatctcttggaagaggaacaacatccgggtcaacgaccgagatgagaggatc
actatgcgaggaggcaaattgatgatttccaacagcaggaagagcgatgctggcatgtac
gtgtgcgttggaaccaacatggtcggagagaaagacagcgatcccgctgagctggtggtg
tttgagaggccggtgttcaccaggcagccggtgaaccaggtggtgttggcagacgacacg
gtggacttcttctgcgaggtgcacggagacccgacgccgactgtccgctggcggagggag
gagggagagctgccccgggccaggtttgagatccgcagcgacaacagtctgcgtctgacc
caggtacgaggcgaggacgagggcacgtacacctgcgtgtcggagaacagcgtgggcaaa
gccgagtcatcggggaccctgcaagtgcacgtcggcccatccatgccccctcagatcgtg
gtccggccacgggaccagatcacggccccgagtcgcaccgtaaccttcctctgcggcacc
aaaggaaaccctccgccggccgtcttctggcaaaaagaaggcagccagatcctgctgttc
cccatccaggagccgtcgcagtcgggccgcttctccgtgtcgctgagcggcgagctcacc
atcaccgacgtccaggtggaggactccggctactacatctgccaggccatcagtgtggcc
ggcagcatcctcaccaaagccctgctggaggtggaaagtgccccttcggaccgcctccca
cccatcatccgacagggcccagccaatcacactttagttcctggctccaccgctcagctg
cactgccacatcatgggcaaccccatgcccagcatccaatgggagaaagacggccagagg
atcctgggaaacgacggtcgaatcagcttgatggacaacggcaccttccaaatcacccac
ctccaggaaacggactccggggtctacacctgcctggcttccagctccagtggagagacg
agctggagtggagtgctcacagtcaaagagagcgccgacccgtgggtcgcccaggccacc
gaacccttccagctgccaggtccgccgcacaagcccatagtcacggacgtgtctaagaac
agcgtctctctgacctggcaacccaacgctcacgaggggggggccgccgtcacctcctac
atcatcgaggccttcagccaatcagcgggcagcacgtggcagactgtagccgacatggtc
aagatggaaacgcacaccatcaccggcctcctccccaacaccatctacctgttcatcgtc
cgggccgtcaatgcctacggcctgagtgacccgagccccatctccgagcccgtcagaacc
caagatgtgagtcctacgggtcagggagtggaccacaggcaagtgcagagggagctggga
gaggtggccgtccagctgcaggagcccgccacgctgacaacagcctccatccgagtgtcc
tggacggtcgaccgtcagtctcagtacgtccagggctaccgtctcttctaccgacccaac
gggggaacctggctcctccaggacatcaactccccctccgagcgcgtcaccgtcctcacc
agcctgctcaaaggaaccgagtacgagatgaagatccggccctatttcgacgaattccag
gggaaggacagccggacgttactggtccgaaccccagaagaggtccccggtgccccaccc
agagctgtcacagtggtaacagtgaatctaagcaacagctccagcatcagcgtctcctgg
gagcctccgcccagcgagatgcagaacggcatcatccaagagtacagggtctggtgcgtg
ggcagcggcggcagcgacaaccagacacactacttcatcaacaggacggtgggcgggaac
acgctgtccgcagcgctgaagggcctgatgcccggcgtgctctaccaggtggaggtggcg
gcagtgaccagcgccggcatcggcacccgcagtcagccagtgtcggtcctcatcaagctg
ccagctgaacagccctccgcgccaggcagcggaggcggcggcggctccagcaacggcggc
gaggagagcagcgtgagtctggccgagcagatcaccgacgtggtcaagcagccggcgttc
atcgcgggcatcggcggagcctgctgggtcatcctcatgggcttcagcgtctggatctac
tgccgacgcaagaagaggaaggagctgagccactacaccgcctccttcgcctacacccca
gcagttggtttccctcacggagagggaacagtactcaatggaaggcccggcgtgctggga
ggcaacatgggcaactacccgtggctggccgactcttggcccaccaccaacctggtccac
agcggtaaagaggccgtcacctgctgcaccagcaatcacgacacggccgagagatactac
aacgacgcaggaatctccaactacctgaatcagacggagaagtacagcatgggcggctcc
accgaagggcccatctacagcaccatcgacgccaccaacgaagacctgaacagcttcgcc
tacgcccagcacgcctccaccgctccctacgcctccacctccatcatgcctttcaccaac
cagatgcaggcgccagcccacagcggcgagcagccagaggacggacactggatcggcccg
ccggggctgtcaggagctcagtacgcccagccggaccgctgcattggtagtaaacccaag
cagaaggcgatggggaaggccgtcaagaccccgtctctgacctggatggaggcgctgccc
cccccgccccccgttggagagctggacgaccagccccccgagcatgaggacatggacata
ggctcggacgaggagtggtgccctcccctcccggagaggacctacctgatggagggctgc
gaggatgagcccagtcctccgcagaggaaggccgcctcctccccggccacctcctacagc
caccagtccaccgccacgctcacgccatcgccccacgaggagagccgagcgccccacgac
ctccctcgccacaaccacgcggacggccagcagctctcgcgcagaaggttgccctgcggt
ccagtgccagttccccaggcgccgagcccgctgctcacccagtccaacccaaacctctcc
ggccaacagcatcacggctcagcggaggctggcacgctgcagagccagagtcctgcccat
cgctgcctccgcagccaggggccggttctggaggaggacgccagcagcaccacgacaccc
gtgcacagccgctcatccccagcagacgcgtgcacgcctcccaaccaaaaatcacgtgtg
aaaaaaaaggtgtcgaagacttcagcgtacagacgagatgcgcaaggagacctgccccct
cctccggagccccccccaggggaggacaggttgcggggcccccaggggtgcatggaggcc
ggcaacgcggtgaacggcgctctgtcctctctggagaggagcgaatacagcagcagcagc
agcagccaccaacggaaaggctcgggacaaagacacaccgacaatgaggagatggtggcg
tacagcagcaaggccggacacctctccaggagtcagatgtccagtaactgctcgaccaca
ggaagctcctcgtccagaggctccacgggctcccgggggatcaactcggcccggaaacac
aacgaggacatgagataa
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integrated database retrieval system
