Cyclopterus lumpus (lumpfish): 117743251
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Entry
117743251 CDS
T09199
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117743251 (zc3h13)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117743251 (zc3h13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
CR_prot_dom_plant
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
117743251
NCBI-ProteinID:
XP_034406995
LinkDB
All DBs
Position
2:complement(10012449..10022902)
Genome browser
AA seq
1866 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSSSTTTSSTSNPAGPSRRPSVFERLGPSTGTNAADSHCR
NWLKTGNCSYGNTCRYTHGTQPRGKGFSFSRSAERPTGDLRERMKNKRQDVDPENLKRDL
DEPTSPTARQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDIGDYDYELSLE
MKRQKIQRELMKLEQENLDKREEIVIKKEETPTKTRATAMPKASPEPLSKQDSPSSRKSS
GSPKHKSATKGPSSGKKEKKALVPSPVSESTRPSKGSHSKKKGPRTPSPPPPVPLDIPVV
GKKHKGKHKNKEKSEEKQKEAKDRGRDTEKHKEKKEKRRDRSDSSHKAKRSLTSEERSGS
VSSPSRGTSPPARKKSTSPKALSHKTPTLVSPPRRSPSPPRHQRTPTPPRHHSPSSHSGS
SAQRHSSSPRRRRSSSPTYHRSSAAAPTSASSPPSSRRSRSPPASHSASSPHRRSDRSSP
SQRHSRGRERSRGERERSPPAQERRQERRDESRSKREKERDDRDYDSEQVSSRDARDDRE
TREARERRDARDRGRETTRDSRDHRDNRDVKDSRESRAETRSSRESLERRDRERERERDR
EKEREKDREREKERERERTDTTTHRKEEPAQEDRNYGRGHGREDGGRAEVKTENRTDRTE
RNGRGRGRANETSDKGSNRNSRGSQLESSHDNWESRSSAVRERSVERSTDRSATERSSER
GSDRDRYEGDRRGEQARDSSYDRRGGHGERDRRDNRERGGEQRAASPNRHQGRSDESERE
ERREDRRTDRTEERRDDRPREREREREREREKEKDREKEREKEAERERTRERERERERER
EREREREREREEREREREERERERERKEREREREREREREQREQRERERQREWEERERGR
EERRERRDDTREDRTVRDTRDDRKTSRKRPRVESSPSPRASPKRATRDLSPAESDGYNSA
DEKSERPIGRGQAKLHPPPLLPSPVCLQPPDSADKNRMLSQVVRPLEPLLRSPPRAAPSD
EKPRKDEERRGAGDKREARNRHEDLEPRGERSRGGDRRGEPLADAPSESRSRVRDQREST
PPPPPLPPPPPPPALTTGSEDRDTAGTQSHEEGKKKTKSQRKGLKKGRKEEVVVGNIVAA
AVDRFKSEPPISVAIDGTPPIHSPKKGAKKKALERKRKRSREGESDVSDEDVSAPQPLNK
RKRGPRTPPPSMRPDHRGPGANTEPSSLSKMDNFSDWSDDDVTDRAAPVETQAPLVPAEP
LKRGGGPRVGRDRERCHPPPIAPLLPQDPPMLLPTLTPQPLMSQPLLRKLPPDQTRSSSM
GSNQSRTSSRRLRSPSNEPAHRDDPQGPRPRRGRLQGANSRDRERERERPVVTEPPGVER
KSRIDQLRRGEPSRSTSSDRQDSRSHSSRRSSPDSEKQARSGSRAGSYDSRERERDREPF
ERERDRKDLRPPQQQPPPPPQQQLQQLQQLQQPLLLQQPLQQQRDWEPEPRDWPSRVREP
LLMRPGRELLLRERDIRDRERLLPEGLIQQHERERERERERERERDSRGDRGDRMMMDLP
PHGDPRAPGRGDLRGDIRGDLRGDIMRQERSEYEPLLPREAFSPPELEKPSNSHHLLGEQ
RELEKTDSIEGDDDGKENDGQSVASVGEEYEPISDDELDEILADSQKKEDQQDDEKITGP
LDVIDVDWSSLMPKTKPEPRAAGAALLRFTPGAVLLRAGISKRLAGPELLEQVREVCKSE
LDDPKDADKLFEHDLGALNMAALNRRVERAGLLRNLGPCCKALCARRDFAIRRQLLKNDK
GLTKHYPATPVVDTELLQMSMRLFRRTMAGPAAGPERPEGGSASAAEVVPAGSSKLGAAQ
PEVCVS
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcaaaaaccatatctgatagcagc
agcagcagcagtaccacgaccagcagcaccagcaaccccgccggcccgtcccgccggccc
agtgtgtttgaaagacttggacccagcactgggactaatgctgctgatagtcactgcaga
aattggctgaagaccggtaattgcagttacggcaacacttgtcgctacacacatggaact
cagccacgaggcaaaggatttagcttcagccggtcagccgagagacccacaggtgatctg
cgggagaggatgaagaataaaagacaggatgttgacccagaaaacttaaagcgagatcta
gacgagcccacatcccccacagcgagacagagagactcctccagaggccgacacagggaa
aaggaggatataaagatcacaaaggagcgcaccccagccagtgaagaagagcccacagag
tgggaaaccaatcgcgaagattccgatatcggtgactacgactacgagttatctctcgag
atgaagcgacagaagattcagcgtgagctgatgaaattggagcaggagaacttggacaag
agggaggagattgtcattaagaaagaagagacccccaccaaaacaagagccaccgccatg
ccaaaggcctccccagagccgttaagcaagcaagactcaccctcatccaggaagtcaagt
ggatccccaaaacacaaaagtgctaccaaaggcccaagctctgggaagaaagagaagaag
gcactagtgccttcacctgtttccgaatctaccaggccttcaaaagggagccacagtaag
aagaaagggcccaggacccccagtcctcctcccccagtccctctagatattcctgtagtt
gggaagaaacacaaaggcaagcacaagaacaaggagaagtctgaggagaagcagaaagag
gcgaaagatcgggggcgagatacagaaaaacacaaagagaagaaggagaaacgcagggac
cgatcagacagttcccacaaggccaagcggtcgttgacatcggaggagcgttccggtagt
gtgtcatctccctccaggggcacatcccccccagccaggaagaaatccacctcccctaaa
gctttgtcccataagacccccacactggtctcccctcctcgcaggtcaccctcacctcca
cgccaccagcgcacccccactcctccgcgccaccactcaccctcctcccactcgggttcc
tctgcccagcggcactcttcgtctcctcgtcgccgccgctcgtcctctcccacctaccac
cggagtagcgcggcagccccgacgtctgcctcctcccctccgagctcccgacgctcccga
tcaccccccgcctcccacagcgcctcctctccccaccgccgatctgaccgatcgagcccc
agccagcgccactccaggggccgtgagaggagccgcggtgaaagagagaggagtccgcct
gctcaggagcgcaggcaggagcgcagagatgaaagccgcagcaagcgggaaaaagagcgc
gatgatcgggactacgactctgaacaggtctcatcacgggacgctcgcgatgaccgggag
actagagaggcccgtgagcgacgggacgctcgagaccgaggaagggaaacaactcgagac
tctcgtgaccatcgagacaacagggacgtaaaggactccagagagagcagagcagagacc
cgctccagtcgagagtcgctggagcgccgggaccgcgaacgggaacgagagagggaccgg
gagaaggagagggagaaggacagagagagagaaaaggagagagagagggagaggactgac
accaccacccacaggaaggaggaaccggctcaggaggacaggaattatgggagaggtcat
ggacgggaagatggagggagggctgaagtaaagacggagaacaggacggacagaactgag
agaaatggacgagggagagggcgtgctaatgaaacttctgataaaggctcaaacaggaac
tcccggggttcccaactggagagcagccatgacaactgggagtcacgtagcagcgcggtg
cgtgaacggagtgtagagaggagcaccgatcgcagtgctaccgaaaggagctctgagagg
ggctcagacagagatcgctatgagggtgacaggagaggggagcaggccagagactcctca
tacgaccggagaggaggccacggagagcgcgatcgcagagacaaccgagagagaggtggc
gagcaacgagcagcttccccaaatagacaccaggggagatcagatgagtctgagagggag
gagaggagggaggaccgcaggacagatagaacagaagagaggagagacgacaggccccgg
gagcgagagagagaaagggagagggagagggagaaagagaaggacagggaaaaggagcga
gagaaagaggcagagagggagcgcaccagggagagagagcgggagcgggaacgagagagg
gagagagagcgagagagggaaagggagagggaggagcgagagcgagagagggaggaacgg
gagagggaaagggagaggaaggagcgagagagggagagggagagagagcgagagagggag
cagcgagagcagcgggagagagagaggcagcgggagtgggaggagcgagagagaggacga
gaggaaaggcgggagaggagagatgacaccagggaggaccgaaccgtcagagacacccgg
gatgaccgcaagacgagtcgcaagaggcccagggtggagagcagcccgagtcccagagcc
tcgcccaaacgagcaactcgggacctcagtcctgcagaaagcgacggctacaacagtgcg
gacgagaaaagtgagcgcccgattggccgagggcaggccaagctccaccctccgcccctc
ctccccagcccagtgtgtctgcagccgcctgacagtgctgacaaaaatcgcatgctgagc
caggtggtgcggcccctggagcccttgttgcgttctccaccgagggctgctccgtccgat
gagaagcccaggaaggatgaggagcgcagaggagccggagacaaaagggaagcacgcaac
cgccatgaggacctggagcctcgtggggaacggagcagaggaggcgacagacgaggagag
cccctcgcggacgccccgtccgaatcccgtagccgagtcagagaccagcgagagtccacg
ccacctccgccgccactgcccccgcccccccctcccccagctctcaccactggcagcgaa
gacagagacactgctggtacccagtcccatgaggagggtaaaaagaagacaaagtcgcag
aggaagggactgaagaagggtcgtaaggaagaggttgtagttggcaacattgtggcagct
gcggtagatcgtttcaagtccgagcccccaatcagcgttgcgatcgatggaactcctccc
atacactcgcccaagaaaggagccaagaagaaggcgcttgaacgaaagaggaaacggtca
cgagaaggagaatctgatgtgtccgatgaggatgtatctgcccctcagcctcttaataag
aggaagcgagggcccaggacgccaccgccgtcaatgaggcctgatcatcgtggtcctgga
gccaacacggagccatcttctctgtccaaaatggacaacttcagtgactggtcagatgat
gatgtcacagaccgagcagcaccagtggaaacacaagctccactggttccggctgagcct
ctgaagagaggtggtggtcccagagtgggcagggacagggagcggtgccaccctccgccc
attgcccctctgctcccccaagaccctccgatgctgctgccgactctgactccgcagccc
ctcatgtcccagcccctgctccgcaaacttcccccggatcagacgcgcagcagcagcatg
gggagcaaccagagtcgcacatcatccagacgcctgcgatcaccctccaacgagccagcc
caccgagatgacccccaaggtccacgaccccgccgcggcaggctccagggcgccaactct
cgggaccgagagagggaaagagagaggccggtcgtgacggagcctccaggggtcgagagg
aagtctcggattgaccagttgaggaggggagagcccagccgcagcacctcctcagaccgg
caggattcacgcagccacagctccaggcgcagctcccctgactctgagaagcaggccagg
tcagggtcccgtgccggctcctacgacagtcgagaacgggagagagacagggagccgttt
gagcgagaacgagaccgaaaggacctccggcctccgcagcagcaacctcctcctcctccg
cagcagcagcttcagcagctgcagcagctgcagcagcccctgctcctccaacagcccctc
caacagcagagagactgggagcctgaacctagggactggcctagcagggtacgggagccc
ctactgatgcgtcctggccgggaacttctccttagggagcgggacatcagggacagagaa
cgcttactccccgaaggactcatccagcagcacgagcgggagcgggaaagagagcgagag
agggagcgagagagggacagtagaggtgaccgaggagaccgaatgatgatggacctgccg
ccccacggggaccccagggccccaggacgaggtgacctgaggggtgacataaggggagac
ctgcgaggggacataatgagacaagagagaagcgaatatgagcctctgctgccaagagaa
gccttcagccctccagagctggagaaaccaagcaacagtcaccatctcctgggagagcaa
cgagagctggagaagactgacagcatcgaaggagacgatgatgggaaagaaaacgatggc
cagtcagtcgcatctgtgggagaggagtatgaaccaatcagtgatgatgagctggatgaa
attttggctgacagccagaaaaaagaggatcagcaggacgatgaaaaaattacaggtcct
ctggatgtaattgatgtggactggtccagcctgatgcccaaaacgaagccggaaccccgg
gcagcaggggcagcgttgctccggttcaccccaggcgccgtgcttcttagggcgggaatc
tccaagcgcctcgctgggcctgagctcctggagcaagtcagagaggtgtgcaagtctgag
ctggacgaccccaaagatgctgacaagctgttcgaacatgacctgggggctctgaatatg
gcggccctgaacaggcgggtggagagggcaggtttgctgagaaacctcgggccctgctgc
aaggccctgtgtgcccgcagggactttgccatccgccggcagctgttaaaaaatgataag
ggcctaaccaagcattaccccgctacgcccgttgtagacaccgagctgctgcagatgagc
atgcgtctcttcagaaggaccatggctggcccggccgcgggcccagagcggcccgaaggt
gggtcggcatcagcagcagaggtcgttccagctggtagtagtaagctcggcgcagcacag
cctgaggtgtgtgtgtcctaa
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integrated database retrieval system
