Cyclopterus lumpus (lumpfish): 117743267
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Entry
117743267 CDS
T09199
Symbol
sec24a
Name
(RefSeq) protein transport protein Sec24A isoform X1
KO
K14007
protein transport protein SEC24
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117743267 (sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117743267 (sec24a)
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117743267 (sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
117743267
NCBI-ProteinID:
XP_034407019
Ensembl:
ENSCLMG00005019066
LinkDB
All DBs
Position
14:complement(3038789..3054862)
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AA seq
1161 aa
AA seq
DB search
MSTAGFNSQNGTGTGQTYANGPSQNPVAPQQLPGVGYGMAHQPTYNPMQAKAPPPPAHPG
LYPSGPYQPVTPVCSYQPGPPHTSYPAASGQSLLTRPLMGGPPSRTPPQSASPGPRVPAA
HATPPPPAVSSSGYYTNPQHPMAPAWQYNAAPQPMGPPATISTPPRGPVAGHVNPASSST
GPPPSTAYSPAPPPPPHVSHNVTQPPGPGMSRSPQHGYTQPGTAPPPMTPMAPHAYQPNR
APYGPPPTGPPPPTMKPAPLPIGLPMATNATPPPPRADAQCGGAVNSTLPPAEHDCPEGD
IECPGTVAGNGPPAAPSGYNHVDNQTGVPPPQPGTPGLHLGHYPSLPPGYQNTGYQNASA
PHNATSPMHPAMQHATQPYTQAPPPYQQPHGGPGPAQLSPSLAAMSLQSTTPEALRVVNL
LQERNLLPPTPIPAPTPCLQQDLQKINCHPEVFRSTLTSIPQTQSLLNKAKMPLGLLLHP
FKDLSQLPVVTSSTIVRCRSCRTYINPFVSFLDQRRWKCNLCFRVNDVPEEFMYNPVSRS
YGEPHKRPEVQNATIEFIAPSEYMLRPPQPAVYLFILDVSHNAVETGYLTVFCQSLLDNI
NALPGDSRTKVGFITFDSTIHFYNLQEGLSQPQMLIVSDIEDIFLPTPDSLLVNLNECKE
LVQDLLKSLPTLFEKTMETQSALGSALQAAYKLLLPTGGRMSIFQTQLPNLGVGTLQSRE
DPNQRAAAKDVQHLSPATDFYKKLALDCSGQQVAVDLFLLSSQYCDLASLGCISRYSAGS
VYYYPSYHHQHTPAQVECFQKDLKRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTD
LLSLPNVNPDAGFAVQMSIEENLDDMQVVSFQAALLYTSSKGERRIRVHTLCLPVVNSLS
DIFAGADVQAITGLLACMAVDRSATASLSDARDAMTNAAIDSLTSYRQSVLTIQQPGLLA
PACLRLFPLFILALLKQKAFRTGTSTRLDDRLFAMCQLKYQPLVYAMLMIHPALYRVDDL
SDEGALNISERTVPQPRVLQLSVEKLSREAAFLMDAGTVMYLWIGRNCHPNFLTQVLGVP
SYATVPDNLYLLPELDTPESQRTRAFVGWLRDQRPFFPSLQVIRDESQLKPTFMQNMIED
RTESALSYYEFLLHLQQQISK
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcggggtttaattcccagaacgggacggggacgggacagacgtatgcaaat
ggtccctcacagaatccagttgccccgcagcagctgccgggggtcgggtacggcatggca
caccaacccacctacaatccaatgcaggccaaagctcccccaccacccgcacaccctgga
ctctacccctctgggccataccaacccgtcaccccggtctgttcctaccagcccggccca
ccgcacacatcctacccagctgcgtcaggccagtcgctgttgacgaggcctctaatggga
ggtcctccgtcccgtacccctcctcagtctgccagccctggtcctagggtgcccgctgca
cacgccacacctccccctcctgctgtgtcttctagtggctactacacaaacccccagcat
cctatggctccagcgtggcagtataacgcagctccccaaccaatggggccacccgctacc
atcagcacacctccccgcggcccggtggctggtcacgtgaacccagcttcaagttcgaca
gggccaccgccatcaacggcttacagccctgcaccgccgccacccccccacgtgtcccat
aatgtcacccagccaccaggcccagggatgtcccgaagccctcagcacggatatacccag
ccaggtaccgcacccccaccaatgactcccatggcgccccacgcataccaaccaaacaga
gctccctacggccccccacccacaggcccaccaccaccaactatgaaaccggcaccgctt
cccattggactcccaatggccaccaatgccacacctccaccacccagagcagatgctcag
tgcgggggggccgttaacagcactctgccccccgctgagcacgactgcccggagggtgat
attgaatgtccaggcacagtggctggcaacggcccgccagcagcgccgagcggctacaat
cacgtcgacaaccaaacgggtgtcccgcccccccagcccggaacacccggtctgcacctg
ggccactacccctccctcccgcccgggtaccagaacaccgggtaccagaacgcctcggcg
ccacacaacgccacctcccccatgcaccctgcgatgcagcacgccacgcagccttacact
caagcaccgccgccataccagcagccacacgggggccccgggccggcccagctcagcccg
tccctggcggccatgagcctccagtccaccaccccggaggccctgagagtggtcaacctg
ctgcaggagaggaacctgctgccaccgacccccatcccggccccgacaccctgcctccag
caggacctgcagaagatcaactgccacccggaggtgtttcgtagtacgctgaccagcatc
cctcagactcagtcactgctcaataaagccaagatgccgctcggcttgctgctgcaccct
ttcaaagacctctcgcagcttcctgtggtgacgtccagcaccatcgtcaggtgtcggtcg
tgcaggacctacatcaaccccttcgtctcgttcctggaccagaggaggtggaagtgcaac
ctgtgctttcgggtcaatgacgttccagaggagttcatgtacaacccagtcagccggtcg
tacggagagccacacaaacgacccgaggtccagaacgccaccatcgaattcatcgcgccc
tcagaatacatgctgaggccaccgcagccggccgtctacctcttcatcctggacgtgtcc
cacaacgcggtggagacgggctacctgaccgtgttctgccagtcgctgctggacaacatc
aacgcgcttcccggagactctcggacaaaggtgggcttcatcaccttcgacagcaccatc
cacttctacaacctccaggagggactctctcagccgcagatgctcatcgtgtccgacatc
gaagatatctttttaccaacaccagacagccttctagtaaacctcaatgaatgcaaagaa
cttgtgcaggatctgctgaagagcctgccaactttatttgaaaagaccatggagacgcag
tccgccctgggctcggccctgcaggccgcctacaagctgctgctgcccaccggcgggcgc
atgtccatctttcagacccagctgcctaacctcggcgtggggaccctccagtccagagaa
gaccccaaccagcgggcggcggccaaggacgtccagcacttgtcgccggcgacggacttc
tacaagaagctggctctggactgctccggccagcaggtggcggttgacctgttcctgctc
agctcccagtactgcgacctggcgtcgctcggctgcatctccagatactcggcagggagc
gtttactactacccctcctaccaccaccagcacacccccgcccaggtggagtgcttccag
aaggatctgaagagatacctgacccgaaagatcggcttcgaggccgtgatgaggatacgc
tgcaccaaaggtctgtccatccacacgttccacggaaacttctttgtgcgctccacagat
ctgctgtcgctccccaacgtgaacccggacgccggcttcgcggttcagatgtccatcgag
gaaaacctggacgacatgcaagtcgtctctttccaggccgcactgctttatacgtccagc
aaaggtgagaggaggatccgtgtccacaccttgtgtctccccgtggtcaattctctgtcg
gacatctttgctggcgctgatgttcaggccatcactggactgctggcgtgtatggctgtg
gaccgctcggcgacggccagtctgagcgacgccagagacgcgatgaccaacgcggccatc
gactcgctgacgtcgtaccggcagtcggtgctgaccatccagcagcccggcctgctggcc
ccggcctgcctccggctcttccccctcttcatcctcgctctgctcaaacagaaagccttc
aggacgggaaccagcacccggctggacgaccggctgttcgccatgtgtcagctgaagtac
cagccgctggtctacgccatgctgatgatccacccggctctttaccgcgtcgacgacctg
agcgatgagggagctttgaacatcagtgagcggaccgtccctcagcccagagtgctgcag
ctgtctgtggagaagctcagcagggaggcggctttcctcatggacgccggcacggtgatg
tatctgtggatcggacgcaactgccacccgaacttcctcactcaagtcctgggagtcccg
agctacgctaccgtgcccgacaacctgtatctgctccctgagctggacacccccgagtcg
cagagaaccagggcgttcgtgggctggctgagggaccagaggccgttcttcccctccctg
caagtcatcagggacgagagccagctgaagcccaccttcatgcagaacatgatcgaggac
cggacggagtcggccctctcgtactacgagttcctgctccacctccagcagcaaatctcc
aaataa
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