Cyclopterus lumpus (lumpfish): 117743608
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Entry
117743608 CDS
T09199
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03430
Mismatch repair
clum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117743608 (mlh1)
03460 Fanconi anemia pathway
117743608 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117743608 (mlh1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117743608 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117743608
NCBI-ProteinID:
XP_034407109
Ensembl:
ENSCLMG00005021832
UniProt:
A0A8C3ATS6
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Position
15:complement(18352678..18360008)
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AA seq
730 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKLLQIQD
NGTGIRREDMDIVCERFTTSKLQTFEDLSAIATYGFRGEALASVSHIAHVTITTKTADAK
CAYRAGYSDGKPKGPPKPCAGNQGTQILVEDLFYNVTTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGVFGNAVSRELIQVGCEDQKLAYKMN
GYISNANYSVKKCILVLFINHRLVESSAVKKAIETVYAAYLPKNMHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVAGGSEVKTP
SAAAESSDRIYAHQMVRTDCRAQKLDAFLQPKEKPPPDPEPAGPSSRVAVPEAAWPATKE
MEADDADMLRAFAEQEAEGSKGNEDDANSAQRKRPRKEQQQPEEVDEDLTAATMPKRRVI
KLSSIKELRAETTENTHRGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFH
QILIYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKKKTEM
LEDYFSVEIDQEGNLTGLPLLLDKYTPLMVGLPMFILRLATEVNWDNEKECFRGLSKECG
MFYSIRKQYILEAELGEEQDAEVNSWRWQVEHILFKAFRTLLSPPKTFSEDGTVLQIANL
PDLYKVFERC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttatccggaggcttgacgagactgttgtcaaccggatagctgcaggagag
gttatccagcgtcctgccaacgccgtcaaggaactgattgaaaactgcttggatgccaag
tccaccaacatccaggtgacggtaaaagacggcgggctgaagctcctccagattcaggac
aacggcacaggcatcaggagagaagacatggacattgtttgcgagaggttcaccaccagc
aaactccagacctttgaggacctctcagcgatcgcaacctatggattcagaggcgaggcc
cttgccagtgtgagccacattgctcatgtgaccataacgactaaaacagccgatgccaag
tgcgcctacagagccggctacagcgacggcaaaccaaaaggcccacccaaaccttgtgcc
ggcaaccagggaacacagattcttgtggaggacctcttctataatgtgaccaccaggagg
aaagctttaaagagccccagtgatgagtactccaggattgtagaggtggtcagcaggtac
gctatacacaattccgggaaaagtttttctgtcaaaaagcaaggagagactgtggcagat
gtgaggactctacccaacgcatctgtggtcgataatatccgaggagtttttggaaatgca
gtcagcagggagctgatccaagttggctgtgaagatcagaagctcgcctacaagatgaat
ggatacatctcgaacgcaaactactcggtcaagaaatgcatcctggtgctcttcatcaac
catcgtctggtggagtcgagcgctgtgaagaaagcaatcgagacggtttacgccgcatac
ctccccaagaacatgcacccttttctatacctcagtttggagatcgctccgcagaacgtc
gacgtcaacgtccatcccacgaaacatgaggtgcatttcttgcacgaagacagcgtcatc
gagagcgtccagaagcacatcgagagcaaactcctcggctccaactcctcacgcacgtac
ttcactcagacgttgctgccggggctgtcagtcgccggcggcagcgaggtcaagaccccc
agcgctgcggcagagtccagcgatcggatctacgcacatcagatggtgaggaccgattgt
cgcgcgcagaagctggacgccttcctccagccgaaagagaagcctccgcctgacccagaa
ccagccggtcccagcagcagggtggccgtgcccgaagccgcctggcctgccaccaaagag
atggaggcggatgatgcggacatgctcagggcctttgccgagcaggaagcggaggggtca
aagggcaacgaagacgatgctaacagcgctcagaggaagcgacccaggaaagagcagcag
cagccagaggaagtagacgaggacctgacggctgcaaccatgcccaagagacgagtcata
aaactgagcagcattaaagagctcagagctgagaccacggagaacacacacagagggctt
caagaaatgctgcagaaccactcgtttgtgggctgcgtgaaccctcagtggaccctgatc
cagcatcacaccaagctgtacctgctcaacaccaccaagctcagccaggagctcttccac
caaatactcatctatgactttggaaacttcggtgtcctaagactgtctaccccggctcca
ctttatgacctcgccatgttggccctggactctgaggagagcggctggacagaagaggat
ggtcccaaagaaggcctggctcagtacatagtggacttcctgaagaagaaaaccgaaatg
ctggaggactatttctccgtggagatagaccaggaaggaaatctaaccgggctgccgttg
ctgctcgacaagtacacgccgctcatggtgggcctccccatgttcatcttgcgcctggcc
actgaggtgaactgggacaacgaaaaggagtgcttcagaggcttgagcaaggagtgcggc
atgttctactccatcaggaagcagtacatcttagaggccgagctgggagaggagcaggat
gccgaggtaaactcgtggcgttggcaagtcgagcacatccttttcaaagccttccggacc
ctcttgagtcctccgaagaccttcagtgaggatggcaccgtgctgcagatcgccaactta
ccggatctctacaaagtattcgagaggtgctaa
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