Cyclopterus lumpus (lumpfish): 117743618
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Entry
117743618 CDS
T09199
Symbol
lmbrd1
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04977
Vitamin digestion and absorption
clum04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
117743618 (lmbrd1)
04980 Cobalamin transport and metabolism
117743618 (lmbrd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117743618 (lmbrd1)
Membrane trafficking [BR:
clum04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117743618 (lmbrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
SPAM
Motif
Other DBs
NCBI-GeneID:
117743618
NCBI-ProteinID:
XP_034407138
Ensembl:
ENSCLMG00005018476
UniProt:
A0A8C3AAE8
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All DBs
Position
15:11483210..11533615
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AA seq
540 aa
AA seq
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MADQQLLTESALGWSIFTCVLLVILAFCWVYIRKFQSRQESEVVSTITAICALAIALITS
ALLPVDIFLVSFMKYPNGTYKEWAANNETRGQIEDTVLYGYYTLYSIILFCVFLWIPFVY
FYYEERDDDNVNRCSQVKNALKYTVGFAIVCVVLLLIGAFVPLEPPPGQNSTQWEKVQYL
FEELGSSHGLPALSFSISSLTLIGMLAVITYTAYGMSVLPLNLIKGTRSVQYERLENTED
IDDVELQIEKLKSKCKDGRPLSSRDRNNLQELEGKLQVLQRRGRHLEIAERNCCTKVGSA
LRPFKILLGIFFILVALLFTVALFISNLDKALHSAGISSGFIIFGTNLTNPLNELLLALQ
PVFPLDYILITVITMYFVVTSMAGIRNMGIWFFWIRLYKIRPKKTRPQALLFLCMILLLI
VLHTSYMIYSLAPQYVMYGSQKYLVQSQMPSAGSTSGNATFATTRTCDADAPEDQCTVTR
SYLFLHKFWFFSTIYYFGNWAFIGAFLIGLVVSCCRGKKSVIEGEVEADDSDLSDDEYVH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagcagctgctcaccgagtcggcgctcgggtggtctattttcacctgtgta
cttctggtaatccttgctttctgttgggtctacattcggaaatttcaaagtcggcaggaa
agtgaagttgtctcaactatcacagcaatatgtgccctcgccattgctttgataacttca
gcacttctaccagtggatatatttcttgtctccttcatgaagtatcccaatggtacctat
aaggaatgggcagcaaacaatgagacaagaggtcaaattgaagacactgtgctgtatgga
tattacacactttactccatcatactattctgtgtcttcctatggatcccctttgtttat
ttctactatgaagaaagggatgacgataacgtgaacagatgctcgcaagtgaagaacgct
ctgaagtacacagttggatttgccattgtctgcgtggtgctccttttaattggagccttt
gttccacttgagcctccacctggtcagaattccacccaatgggaaaaagtacaatacctt
tttgaagagcttggaagtagtcatggtctacctgctctatctttctccatcagctccttg
accttgattggcatgttggcagtgatcacttacacggcatacggtatgtctgtgctgcct
ttgaatctgataaaaggcacacggagcgtgcagtatgaacgcctggagaacacagaggac
attgatgatgttgagctccagatagaaaagctgaagtccaagtgtaaagatggacgtccc
ctctcctcaagggacagaaacaacttgcaggagctggagggcaaactgcaggtcctccag
cgcagggggagacacctggaaattgcagagaggaactgctgcactaaagtggggagtgct
ctcagaccgttcaagatattgctgggcattttctttatcctcgttgcactgctgttcact
gttgccttgttcatttcaaatttggataaagctctccactctgcaggcatcagctctggg
ttcataatctttggcaccaacctaactaatcctctgaatgaacttcttttagccttacaa
cccgtctttccattggactacatcctgatcacagtcatcaccatgtactttgttgtcact
tccatggctggcattcgcaacatgggcatctggttcttctggataaggctgtacaaaatc
agacctaagaaaactcgcccccaggcgcttctcttcctctgtatgattcttctcttgatt
gtccttcacaccagctacatgatctacagcctagccccacaatacgtcatgtacggcagc
cagaaatatcttgtacagagtcagatgccctcagctggttctacatctgggaatgctact
tttgccaccacaaggacctgtgatgctgatgcgcctgaggaccagtgcactgtgacaaga
tcctatcttttcctccacaagttctggttcttcagcaccatctattactttggtaactgg
gcctttatcggggctttcctcattggtctggtggtgtcctgctgcagagggaagaagtct
gtgattgaaggagaggtggaggctgatgactccgacttaagtgatgatgaatatgtgcac
tga
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