Cyclopterus lumpus (lumpfish): 117743629
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Entry
117743629 CDS
T09199
Symbol
arhgef7b
Name
(RefSeq) rho guanine nucleotide exchange factor 7b isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117743629 (arhgef7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117743629 (arhgef7b)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117743629 (arhgef7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_1
SH3_9
CH
PH
SOS1_NGEF_PH
DUF2204
RHG20_PH
ZapB
Motif
Other DBs
NCBI-GeneID:
117743629
NCBI-ProteinID:
XP_034407162
Ensembl:
ENSCLMG00005017440
LinkDB
All DBs
Position
2:9676564..9690825
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AA seq
798 aa
AA seq
DB search
MNPAEQTVTWLITLGVLESPKKSISDPEAFLQTSLQDGAVLCRLLERLRPGTVDKFFQEP
RGDSESQRNISEFVKGCGAFGVEPFEVNDLLQGLNFPKVLNSLVALNKATEDLSVSEDGV
CVPHSSHLRIKSFDSLNTHSRSSKVLQPQYRSLDMSEGSGCGHVLFKARFTFQQTNEDEL
SFSKGDIVSVSRQEDGGWWEGSVNGNSGWFPSNYVRELKGSDKTLEKPKSGTLKSPPKGC
DTTILSKTYYNVVLQNILETESEYSRELQSLLGSYLRSLHPTDRLSNVDIGHIHGNLEEI
STFQQMLVQSLEEHTKLPENQQRIGAFFLNLLPQIKPIYVAYCSNHPFAVNVLVQHSEEL
GEYMESKGSSTPGILTLTTSLSKPFTRLERYPTLLKELDRHMEDQHPDRADLIAAMMDFK
SFAAQCQQVRKKKDLELQILTEPIRNWEGDDIRTLGPVLHMSHSTVHTQNCQDSNERYLV
LFPHTLLVLSASLRMSGFIYQGRIPLSGMLISRIEDGENLKNAFEISGGQCDRMQVACNS
QHELQEWLDLLTKHTHTPATSTHRPQSVCHTLPSQPATPSRHSESRGGSVGHTYHTLPHP
PSFGTVLSNSPMWGPLEPPSTPKPWSLSCLRPAPPLRPSAALCLKEDMSKSPKNMKKLLP
KRKPDRKPSEEDFTVRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSSRKDVHMLFPE
EEKIIVEETRSNGQTVVEERSLVDTVYSLKDEIQGLKQDNKRMKRTLEEEQRARKELEKV
VRRVLKTMNDPTWDETNL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggccgaacagacggtaacgtggctcataacgctgggggtcctggagtccccc
aagaaaagcatctcggatccggaggctttcctccaaacgtccctgcaggatggagcggtg
ctctgcaggctgttggagcgactcagacccgggacggtggacaaattcttccaggagccg
aggggcgacagcgagagtcagcggaacatctccgagtttgttaaaggctgcggggctttc
ggcgtggagccctttgaggtcaatgacctcctgcagggactgaacttccccaaggtccta
aactccttggttgccctcaacaaagctactgaagatttaagtgtttctgaagacggtgtg
tgcgtgccgcactcctcacacttgaggatcaagtcctttgactctctgaacactcacagt
cgctcctccaaagtgctgcagcctcagtaccgcagcctggacatgtcggagggcagcggg
tgtggccacgtgctgttcaaggcgcgctttaccttccagcagaccaacgaggacgaactc
tcgttctccaagggcgacatcgtcagtgtgagccggcaggaggacgggggctggtgggag
ggctcggtcaacggcaattccgggtggttccccagtaactacgtacgggagctgaaagga
agcgacaagacattagaaaagccgaagtctgggaccctgaaaagcccccccaaaggttgt
gacaccaccatcctcagtaagacctactacaacgtggtcctgcagaacatcctcgaaacg
gagagtgaatattcgagggagctccagagtctccttggctcctacctgcgctctctgcac
cccacagacagactcagcaatgttgacatcggtcacattcacggcaatctggaggagatc
tcaaccttccagcagatgttggttcaatccttggaggagcacacaaaactcccagagaac
caacagaggatcggggccttcttcctcaacctattgccccagataaagcccatctatgtg
gcctactgctccaaccacccattcgctgtcaacgtactcgtacagcacagtgaggagctg
ggggagtacatggagtcaaagggctcgtccactcctgggatcctgactctcaccactagt
ctgagtaaacccttcaccagactggagaggtacccaacgctgctgaaggaactggacaga
cacatggaggaccaacaccctgacagagccgatctcattgctgccatgatggactttaaa
agctttgcagctcagtgccagcaggtgaggaagaagaaggacctggagttgcagattcta
acggagccgatcagaaactgggagggggatgacatcagaaccctcggccccgttctccac
atgtcccattcgacagtccacacgcagaactgtcaggactcaaatgaacgctacctcgtc
ctcttccctcacactctgctcgtgctctctgccagcttgaggatgagcggcttcatctac
cagggaaggataccgctgtcggggatgctcatctccagaatagaggacggagaaaacctg
aagaatgctttcgaaatttccggtggccagtgtgatcggatgcaggtggcctgtaacagt
cagcacgagctccaggagtggctggaccttctcactaaacacacacacactccggccacg
tccacacacaggcctcagtccgtctgtcacacattgccctctcagcccgccactccctcc
agacactctgagtctcgtggagggagcgttggacacacctaccacaccctcccccatccc
ccgtcattcgggacggtcctcagtaacagccctatgtgggggcccctggagccaccgagt
acccctaaaccctggagcctgagctgccttcgccctgctcctccactccggccctcggcc
gctctctgcttgaaggaggatatgagcaagagtccgaagaacatgaagaagctcctgcca
aagaggaagccagacaggaaaccttcagaggaggacttcaccgtcagaaaaagtacagca
gctctagaggaggacgctcagatactgaaggtgattgaggcttactgcaccagcgccaag
acgcgacagacgctcaactccagctccagcaggaaggacgtgcacatgttgttcccagag
gaggagaagatcatcgtggaggagaccaggagcaacgggcaaactgtagtggaggagagg
agtctggtggacaccgtgtacagtctgaaggatgaaatccaggggctcaaacaggacaac
aagaggatgaaaaggacgctggaggaggagcagcgagcgaggaaggagctggagaaggtc
gtcaggagagtcctgaagaccatgaacgaccccacctgggatgagacgaacctctga
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