Cyclopterus lumpus (lumpfish): 117743702
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Entry
117743702 CDS
T09199
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117743702 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117743702 (gbf1)
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
117743702 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
117743702
NCBI-ProteinID:
XP_034407333
Ensembl:
ENSCLMG00005005452
LinkDB
All DBs
Position
15:23449609..23526483
Genome browser
AA seq
1868 aa
AA seq
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MVDKSIYIVQGEIGTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILNHIQELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDADHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKLKMRAGGMSESSKWKKQKRSPRPPRHM
VRSPSGQMDSTQSGTLSNNNLSGGVPFIEPGSSTSSLLASDSAASSTSSPTTTDSGLDTC
SKATSREDLSDLEQCNSATALPGSEPGSPDAHSADRQAGPAQSASVESIPEVLEDKDSVT
EQSDSSSIHDIDYVNPRGVRFTPSTQRDGASLIPYGLPCLRELFRFLISLTNPQDRHNTD
AMMHMGLQLLTVALESAHITNYQSLLGLVKDELCRHLFQLLSVDRMNLYTSSIRVCFLLF
ESLRVHLKFQLEMYLKKLIDIITSENIKMPFEMKEMALEALVQLWRIPSFVTELYINYDC
DFYFSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSTQQDQ
SDTLLAEAEASTTNGTDATADPNRLGSTSDLSLPPAENAPVCPPTSGHLMAEKMRLGRQD
QGENDSAEKRAPKKPQRFSSCLPDSQELVDIRTKKKLLITGTEQFNQKSKKGIQFLQEKG
LLSSPLDNDQVAQWLRENPRLDKKMIGEYVSDRKNMELLDSFVNTFTFQGLRIDEALRLY
LEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFVTNDAGFALAYAVIMLNTDQHNHNVRKQ
NIPMTIEQFKKNLKGVNGNKDFDQDMLEDLYNAIKNEEIVMPDEQSGLVKDNYVWSVLLH
RGATPEGVFLHLPPGSYDHDLFTMTWGPTIAALSYVFDKSLDDNIIQKAITGFRKCAMIA
AHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNNKAQTAAKTVFDLAHRHGNILRE
GWKNIMDAMLQLFRAELLPKAMVEVEDFVEPNGKISLQRVETPSNRGESAVLSFVNWLTL
SGAEQSGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESLQELMKALISVTPDE
ETYDEEDAAFCLEMLLRIILENRDRVSCVWQTVRDHLCHLCVHPNESCFLVERAVVGLLR
LAIRLLRREDISSQVLLSLRLLLMMKPPVLSRVSREVAFGLHELLKTNAANIHSTDDWFT
LFSLLECIGAGVKPPASFQLASTSTDNDTGALSDSELPSHHVSEVSLDRGYTSDSEIYTE
HSKTRIPRSTTDVDVASSGWLVVGKDDLEMSKTPPVNSKAQLNNPLVNQYSLTLGQDLGQ
HDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRAIRVFVEASLNGGYRNHDKKKSHKYDS
SKSRMRKKAGGRDKEAGGGTRRAGSRASNQRLSRSHSDEEEDEGVPASYHTVSLQVSQDL
LDLMHTLHTRAASIYSSWAEEQRHLEAAGRKIEADSQTLWTSCWCPLLQGIAWLCCDARR
QVRMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVSGMEETRMR
ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVM
DTAGIFHSADSRTGYSDLWEITWERIVCFLPHLREELFKQTVIPDPVPSPPAEPVQPTPS
AGRPSSPQASPPPAQPPSPVPVNPAETRTSSRPASPLEPQPGSDRSSPVPHSIPSVPLTT
SPAMSPSPLSQSPLILQPLASPLQVGGPPMSLPIILNPALIEATSPVPLLPGPRPTSLSD
EVNQRTPS
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagagtatctacatcgtccagggggaaattggcaccgttgttggagctatc
aagaggaactccagatggaatacgcacactccactggacgaagaacaggaccctttactt
aacagctttggccacctcaaggaaatactcaaccacatccaagagctctctgacgttgag
ccaaacgttttcctgaggcccttcctggaagtggtccgctccgaggacaccaccggacca
atcacaggcctcgccctcacttctgtcaacaagttcctttcctatggcctcatagacgcc
gaccatgaagccgcagcagaggccattgagaacatggccgacgccgtcacacacgctcgg
ttcgtgggaacggacccggccagcgatgaagtggtcctgatgaagatcctccaggtcctg
aggactctgctgctgaccccggttggagcccacctgaccaacgagtccgtttgtgagatc
atgcagtcctgcttcaggatctgcttcgagatgcgcctcagtgagctcctcaggaagtca
gctgaacacacactggtggacatggtgcagctcctgttctccagacttccacagttcaaa
gaggaggccaagagctttgtgggtgccaacatgaagaagttgaagatgcgcgccggtggg
atgagcgagtcatccaaatggaagaagcagaaacgctcaccgaggccgcctcgccacatg
gtccgaagtccctccggtcagatggactcaacccagtccggcaccctgagcaacaacaac
ctttcaggtggcgtcccgttcattgagccaggctcgtccacctccagcctactggcttca
gacagcgcggcttcgtccacctccagccccacaaccacagacagtggtctggacacctgt
tccaaagccacctccagggaagacctttctgacctggaacagtgtaactctgctaccgca
cttcctgggtctgagcccggctctccggatgcacattctgcggacaggcaggctggtccg
gctcagtcggcctcggtggagtccatcccggaggttctggaggacaaagactccgtgaca
gagcagtcagacagcagctccatccacgacatagactatgtcaatcccagaggtgtgcgc
ttcacaccgtccacacagagagacggagcgtccctcatcccttatggccttccgtgtctg
agggagctgttccgcttcctgatctcactcaccaacccacaggaccgccacaacactgat
gccatgatgcacatgggcctgcagctgctcactgtggcgctcgagtcagcgcacatcacg
aactaccagtcactgctcggactggtcaaagacgagctctgcagacatctcttccagttg
ctgagcgtggaccggatgaacctctacacttcctccatacgagtttgcttcttgctcttt
gaaagcctgagggtgcacctgaagtttcagctcgagatgtacctgaagaagctgatagac
atcatcacgtcagagaacatcaagatgccctttgagatgaaggagatggctctggaggcc
ctggtccagctgtggaggattcccagcttcgtcactgagctgtacatcaactacgactgt
gacttctacttctccaatctgtttgaggacctcaccaagctgctgtccaagaatgcgttc
ccagtgtcggggcagctctacaccacccacctgctgtcactggaggctctgctcaccgtg
atcgacagcactgaagcccactgccaggccaaggtgctcaacagcactcagcaagaccag
tcggacaccctgctggcggaggcagaagcttccaccaccaacgggacggacgcgacagct
gatcctaacagactgggcagcaccagtgatctgagtcttccaccagctgagaatgcacca
gtgtgtccaccaaccagtggccacctgatggcggagaagatgagactgggcagacaggat
caaggggagaatgactctgcggagaagagagccccgaagaagcctcaacgtttctcgtca
tgtttacctgattcccaagagttggtggacattagaaccaagaaaaagctgctgatcact
ggcacagagcagttcaaccagaagtccaagaagggaatccagttcctgcaggagaaaggt
ctcctcagcagccctctggacaacgaccaggtggcccagtggctcagagaaaacccccga
ctggacaaaaagatgatcggcgagtacgtcagcgaccgcaagaacatggagctcctggac
agctttgtcaacacgttcaccttccaggggcttcgtatcgatgaggccctgcggctctac
ctggaggccttcagactccccggagaggctcctgtcatccagagactcctggaaaccttc
acagacaactggcataaagtgaacggctctcccttcgtgaccaacgacgccggcttcgcc
ttggcctacgccgtcataatgctgaacactgaccagcacaaccacaatgtccgcaagcag
aacatccccatgaccatcgagcaattcaagaaaaatctgaagggagtgaatggaaataaa
gactttgaccaggacatgttggaggatctctacaacgctatcaagaacgaggagatcgtg
atgccagacgagcagtccgggttggtgaaggataactacgtctggagcgtgctgctccac
cgcggcgccacgcccgaaggggttttcctccacctgccacccggcagctacgaccacgac
ctgttcaccatgacctggggacccaccatcgccgccctctcctacgtcttcgacaagagc
ctggacgacaacatcatccagaaggccatcaccggcttcaggaagtgcgccatgatagca
gctcactatggcttcagtgatgtctttgacaacttgatcatctccctctgcaagttcacc
actctgagcagtgagtctgtggaaaaccttcctacagtgtttggcagcaataataaagcg
cagaccgcggccaagacggtgtttgacctcgcccatcggcacggcaacatcctgagggag
ggctggaagaacatcatggacgccatgctccagctgttccgggccgagctcctgcccaaa
gccatggtggaggtggaagacttcgtggagcccaatgggaagatttctcttcaaagagtg
gagacgccttctaatcgcggggagtcggcggtgttgagtttcgttaactggctgacgctg
agcggagccgagcagtcgggactcagaggaccgtccacggaaaaccaggaggccaagcag
gcggccatcctctgcatcaagcaatgtgacccagagaagctgatcacggagagtaaattc
ctccagctggagtctctacaggagctgatgaaggccctgatatcagtcaccccggatgaa
gagacctatgatgaagaggatgctgccttctgcctggagatgctgctgcgtatcattctg
gagaaccgagaccgtgtgtcgtgtgtgtggcagacggtgcgagaccatctctgccatctt
tgtgtccaccccaacgagagctgcttcctggtggagagggctgtggtgggactccttcgg
ctcgcaatccgcctgctacggcgagaagacatcagctctcaggttctcctctccctgcgt
ctcctgctgatgatgaaacctcccgtgctgtcccgggtcagcagggaggtggcctttggc
ctccacgagctgctgaagaccaacgcagccaacatccacagcacggacgactggttcacg
ctcttctccttgctggagtgcatcggagccggagtgaagccgcccgcctccttccagctc
gcctccacctccactgacaacgacacaggagccctgtcggatagcgagctgccatcccat
catgtcagtgaagtgagtttagaccgaggctacacgtctgactcggagatctacaccgag
cacagcaagaccaggatccctcgctccacaacagatgtggacgtagcaagcagtggatgg
ctcgtggttgggaaagatgaccttgagatgagtaagacccctccagtaaactccaaagct
cagttgaacaacccactggtcaaccagtacagcctgacgctgggtcaggacctgggccag
cacgacaccaagtctctcatcaagtgtgtcgagacgctgtcgttcatcgtccgcgacgcc
gcccacgtcacgccggacaactttgagctgtgtgtccgagccatccgagtgtttgtggag
gccagcctcaacggaggttaccgcaaccacgacaagaagaagagccacaagtacgactcc
tccaagtcccggatgagaaagaaggcaggggggcgggacaaggaggctggaggcgggacc
aggcgagctggcagccgggcgtccaatcagcgtctgtcgcgttcccacagcgacgaggag
gaggacgagggtgtgccggccagctaccacacggtgtcattacaggttagtcaggatctg
ttggacctcatgcacactctgcacacgcgggctgccagcatctacagctcctgggcagag
gagcagcgccacctggaggccgcaggaagaaagatcgaggccgactctcagactctgtgg
accagctgctggtgcccactgctgcaaggcatcgcttggctgtgctgcgatgccaggcgt
caggtccgcatgcaggccctcacctacctccagagggcgctgctggtccacgatctgcag
acgctggatgcaaccgagtgggagtcgtgcttcaataaggtgctcttccccctgctgact
aagctgcttgacaacataagcccagccgatgtgagcggtatggaggagaccaggatgaga
gcctgcaccctgctgtcaaaggtcttcctccagcacctgtctcctctgctgtccctgccg
acctttgctgccctctggctcaccattctggatttcatggacaagtacatgcacgcaggg
tccagtgacctactgttggaggccatccctgagtccctgaagaacatgctgctggtgatg
gacacagcaggcatcttccacagcgccgactccaggacggggtactcggacctgtgggag
atcacctgggagcggatcgtgtgcttcctgccccacctgagggaggagctcttcaagcag
acggtcatcccagatccggtgcccagtcctccagcagagcccgtgcagccgacaccctcg
gcaggccggccttcatcccctcaggcgtctccaccacctgctcagcccccctccccagtc
ccagtgaaccctgcagagacccggacctccagcaggccagcgtcacccctggagccccag
ccaggatccgaccgctcgtccccggtgccgcactcgattccctccgtgccgttaacgacg
tcccccgccatgtccccctcgcccttgagccagtcccccctcatcctgcagcccctcgcc
tcccccctgcaggtgggaggcccgcccatgtccctgccaatcatcctgaaccccgccctc
atcgaggccacgtcccctgtgcctctgcttcctggtcccaggcccacgagcctgtctgac
gaggtcaatcaaaggaccccaagctaa
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