Cyclopterus lumpus (lumpfish): 117743753
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Entry
117743753 CDS
T09199
Symbol
slc8a1b
Name
(RefSeq) sodium/calcium exchanger 1b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04260
Cardiac muscle contraction
clum04261
Adrenergic signaling in cardiomyocytes
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117743753 (slc8a1b)
04020 Calcium signaling pathway
117743753 (slc8a1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117743753 (slc8a1b)
04261 Adrenergic signaling in cardiomyocytes
117743753 (slc8a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117743753 (slc8a1b)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117743753 (slc8a1b)
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
117743753 (slc8a1b)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Others
117743753 (slc8a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
TRM13
Motif
Other DBs
NCBI-GeneID:
117743753
NCBI-ProteinID:
XP_034407461
Ensembl:
ENSCLMG00005002404
UniProt:
A0A8C2WM01
LinkDB
All DBs
Position
15:1397931..1506624
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AA seq
949 aa
AA seq
DB search
MGRRDPSSLRSAALRLAVVAVVLLLELHPSLAGAPPEQSLGGFVSAVSTNKTECSKPEAC
TKGVVLPIWEPQNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEKEITI
KKPNGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVIGHKFEAGTLGPSTIVGSA
AFNMFVIIGLCVYVVPDGETRKVKHLRVFFVTATWSIFAYIWLYLILSVISPGVVQVWEG
LLTFFFFPICVLFAWVADRRLLFYKYVYKRYRTGKQCGMIIETEGDRPLPSKVDIEMDGK
MLNSHGVDFLDGPLGLDIDEKDLDEEETRRDMAKILKELKQKHPDKEVEQLIELANYQVL
SQQQKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSMHEVRSEVGDNDPISKIFFEPC
SYQCLENCGTVAVNVVRRGGDLGKALAVDYRTEDGTANAGSDYEFTEGMVVFKAGETMKE
IRVGIIDDDIFEEDENFLIHLSNVKVLTSDGEEAEGGESENHVDSMACLGLPSTATVTIF
DDDHAGIFTFEEPVFHVSESVGTMEVKVLRTSGARGVVTLPYKTVEGTARGSGEDFEDAH
GVLEFQNDEILKSITIRILDREEYNKQSSFYVLLETPQWRRSGKERTEEQLKEEEKEEEE
EEALAGKDEEEQRIADMGRPMLGDHVKLEVIIEESYEFKNTVDKLIKKTNLALLVGTNSW
RDQFIEAITVSAGEDDEDDECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACF
VVSICMIGLLTAVIGDLASSFGCTVGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYAD
ASIGNVTGSNAVNVFLGIGVAWSIAAIYHNSKGEEFRVDPGTLAFSVTLFTIFAFIAVGV
LMYRRRPEIGGELGGPRTAKLMTCMLFFSLWLLYILFSSLEAYCHIQGF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccgggatccgtcctccctccggtccgccgccctgcggctagcagtcgtggcc
gtggttctcctcctcgagctccacccctcgttggccggcgctccccccgagcagagcctg
ggcggcttcgtgtccgcggtgtccaccaataagactgaatgcagcaagcccgaggcgtgc
accaagggggtggtcctgcccatctgggagccccaaaacccctcattcggcgacaaagtg
gcccgggcgacggtgtacttcgtggctctggtctacatgttcctgggcgtgtccatcatc
gcggaccgtttcatggcatcgatagaggtcatcacgtcgcaggagaaggagatcaccatc
aagaaacccaacggggagaccaccaccaccacggttcgaatctggaacgagaccgtgtcc
aatctcaccctcatggctctgggctcttcggcccccgagatcctgctgtcggtcatagag
gtcataggtcacaagttcgaggccggcacgctgggcccctccaccatcgtgggctccgct
gccttcaacatgttcgtcatcatcgggctgtgcgtgtacgtcgtgccggacggcgagacg
aggaaggtcaagcacctgcgcgtcttcttcgtcacggccacctggagcatcttcgcctac
atctggctctacctgatcttgtccgtgatctcgcccggcgtcgtgcaggtgtgggagggg
cttctcaccttcttcttcttccccatctgcgtgctgttcgcctgggtggccgaccgccgc
ctgctgttctacaagtacgtgtacaagcgctaccgcaccggcaagcagtgcggcatgatc
atcgagaccgagggggaccgcccacttccttccaaggtggacatcgagatggacgggaag
atgctgaactctcacggcgtcgacttcctggacggtccgctgggtctggacatcgacgag
aaggatctggacgaggaggagacccgtagagacatggccaagatcctgaaggagctgaag
cagaaacaccccgacaaggaggtggaacaactcattgagctcgccaactaccaagtcctg
agccagcagcagaagagccgcgccttctaccgctgccaggccacccggctgatgaccggc
gccggcaacatcctgaagaagcacgccgccgatcaggcgcgaaaggccgtcagcatgcac
gaggttcgctccgaggtcggcgacaacgaccccatctccaagatcttctttgagccctgc
tcgtaccagtgcctggagaactgcggcacggtggcggtgaacgtggtgcgacgcggcggc
gacttgggcaaagcgctcgccgtggactaccggacggaggacggcacggccaacgccggc
tcggactacgagttcacggagggcatggtggtcttcaaggccggcgagacgatgaaggag
atccgcgttgggatcatcgacgacgatatcttcgaagaggacgagaacttcctgattcac
ctctccaacgtgaaagtgctgacgtccgacggcgaggaggccgagggcggcgagtcggag
aatcacgtggactcgatggcgtgcctcggcttgccctccacggcgaccgtcaccatcttc
gacgacgaccacgccggcatcttcacgttcgaggagcccgtcttccacgtgagcgagagc
gtcggcaccatggaggtgaaggtgctgaggacgtcgggggcgcgcggcgtggtcacgctg
ccgtacaagacggtggagggcacggcgcgcggcagcggagaggacttcgaggacgctcac
ggcgtcctggaattccagaacgacgagatcttgaagagcataaccattaggatcttagac
cgggaggagtacaataagcagtcttccttctacgttctgctcgaaaccccccaatggaga
cgcagcgggaaggaacggacagaggaacagctgaaggaggaagagaaggaggaagaggaa
gaggaggcgctggcaggaaaagacgaagaggaacagcgcatcgctgacatgggccgtccc
atgctgggagaccacgtcaagctggaggtcatcatagaggaatcctacgagttcaagaac
acagtggacaagctgataaagaagaccaacctggctctgctggtaggaaccaacagctgg
agagaccagttcatagaggccatcactgtgagcgcaggcgaggatgacgaggatgacgag
tgcggtgaggagaagctgccgtcgtgcttcgactacgtgatgcacttcctcaccgtgttc
tggaaggttctgttcgccttcgtgccgcccacggactactggaacggctgggcctgcttc
gtggtgtccatctgcatgatcggcctgctgaccgccgtcatcggcgacctggcctccagc
ttcggctgcacggtgggcctcaaggactccgtcacggcggtggtgttcgttgccttggga
acctccgtcccagacacctttgccagtaaggtggccgctacccaggaccagtatgccgac
gcgtccatcggcaacgtgaccggctccaatgctgtgaatgttttcctcggcatcggggtg
gcgtggtccatcgccgccatctaccacaacagcaagggggaggagttcagggtggatccg
ggcacgctggccttctccgtcacactcttcaccatcttcgccttcatcgccgtcggcgtg
ctgatgtaccggcggcggccggagatcggcggagagctggggggtccgcggacggcgaag
ctcatgacctgcatgctgttcttcagcctgtggctcctctacatcctcttctcctcactg
gaggcctactgccacatccagggcttctaa
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