Cyclopterus lumpus (lumpfish): 117743810
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Entry
117743810 CDS
T09199
Symbol
smap1
Name
(RefSeq) stromal membrane-associated protein 1 isoform X1
KO
K12486
stromal membrane-associated protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117743810 (smap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117743810 (smap1)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117743810 (smap1)
Endosome - Golgi transport
Arf GTPase associated proteins
117743810 (smap1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
DUF4589
Motif
Other DBs
NCBI-GeneID:
117743810
NCBI-ProteinID:
XP_034407559
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All DBs
Position
15:20763610..20844006
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AA seq
393 aa
AA seq
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MTTRSEREKAQKLNEQHQVILSKLLREADNKHCADCDAKGPRWASWNLGVFMCIRCAGIH
RNLGVHISRVKSVNLDQWTPEQIQSMVDMGNNRAKRLYEDHLPENFRRPQTDQAVEVFIR
DKYERKKYYNKEALAAAPQSECKAGPKESAEPAVDLLGLDAPEEGGRGLVDAAPIGEELD
IFGPMVSNPLPSSNNTQQSGSGTAPGQADPSTSSSASSSTSTTTTTKAEEKKKLLSKDSI
LSLYASSSVASQPQSQQLPVPGQGIPPQTKKIIAPLVEGMYVGQPQMQFTPQGFAPGASG
AVPPTTTTTTMMGGGGAVMPNGGYAGMQQQGGMPASQGQNMYGTQQGQWGMSQMTQQMSG
MAVSGGQSGAPAAGWPAAPPPASGQTLSTQLWK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcggtcggagcgagaaaaagcccagaaactgaatgagcagcatcaggtcatt
ctgtctaaactgctgagggaggcagacaacaagcactgtgccgactgtgatgcaaaaggt
cctcgatgggcgtcatggaacctcggggtgttcatgtgcatccgctgtgccggcatccac
cgcaacctgggtgtccacatctccagagtaaaatctgtcaatctggaccagtggaccccc
gagcagatccagagtatggtggacatgggcaacaaccgggccaaacggctgtacgaagac
cacctcccggagaacttcaggcggccacagacggaccaagcagtggaggtcttcatccgg
gacaagtacgagaggaaaaagtactacaacaaggaggccctggctgcagctccgcagtcg
gagtgtaaagccggtcccaaggaaagcgcggagccggccgtggacctgctgggcctggat
gctccagaggagggtgggaggggcttggttgatgctgcaccaatcggcgaggaactggac
atctttggaccaatggtctccaaccctctcccctcttctaacaacacacagcagtccggc
tccggtacagcacctggacaggcagacccctccacctcctcctctgcctcctcctccacc
tccaccaccaccaccaccaaggcggaggagaagaagaagcttctttccaaggactccatc
ctgtctctgtacgccagcagctcagtggccagtcagccgcagagccagcaacttcctgtt
ccgggacaaggaatcccaccgcagaccaaaaaaatcatcgccccccttgtagaaggaatg
tacgtgggccagcctcagatgcagttcaccccgcagggtttcgctccgggggcgtccgga
gccgtcccacccaccaccaccaccaccaccatgatgggcggaggaggggccgtgatgccc
aacggcggctacgcgggcatgcagcagcagggcgggatgccagccagccaagggcagaac
atgtacggcacgcagcaaggccagtggggcatgagccagatgacccagcagatgtcaggc
atggctgtgagtggtggccagtcgggggcccctgcggccggctggcctgcggctcccccg
ccggcttccggccagaccctcagcactcagctgtggaagtga
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