Cyclopterus lumpus (lumpfish): 117743839
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Entry
117743839 CDS
T09199
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117743839 (btaf1)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117743839 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
117743839
NCBI-ProteinID:
XP_034407623
Ensembl:
ENSCLMG00005022092
LinkDB
All DBs
Position
15:19709175..19731271
Genome browser
AA seq
1851 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPTPKPKEESSEDLSPEDSSCDRLSFYHFDISRLLKHGASLLGS
AGAEFELQDDATGEIDPKERLARQRKLLQKKLGLDMGAAIGIDTEELFNDEDLDCTCQPS
GLRAHGSKGTAGSSSHNHLPIQAADLIDSEFRPGMSSRQKNKAKRMAKLVAKQRSKDMEP
NEKSNDSFEGEPEEKRRKTTNVVIDQPATEHKVLIDNDPENTGLLEEEWPLESFCDELCN
DLFNPSWEIRHGAGTGLREILKSQGAGGGKLVGSTAEQMLRQHQEWIEDLVIRLLCVFAL
DRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMIVDVMLKLLKEDQWEVRHGGLLG
IKYALAVRQDLISVFLPRVLPAITVGLQDLDDDVRAVAAASLIPVVEGLMQLLPNKVPFI
VNTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTISS
VRRAALETLFTLLSKADESCAMWINPILQEMLRHIFQSCILESNEEILELIQKVWMELLS
QAPQQYVVAASCPWMGAWLCLMMQASQIPIDINMLVEVKARCKDKAGAKARQGTIQVKET
TQEYIAGAETVTDDPLTRDYVVIRSRLMAAKLLGALCRCICDPQLNAASQEIRPAESLGQ
LLLFHLNSKSALQRIAVALVLCEWAAMQKDCQVVSLMVQPRLLAILSEHLYYDEIAIPFT
RMQNECKQLIAMLADAHIDLQDRLNCSVFTIDQANDLVTTIFTESTAGLNVNSNQWQALD
GKRQQAQATVAETNIDWQQLHLRVHMVTACAVINLQVLPEKLNPLVRPLMETIKREENTL
IQGYAASFIAKLLQQCARRSPCPNPKIIKNLCASACMDSAVTPSSACPVPPTQEHAKGSG
LEKDCTHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKNPTTELPPGSTICTDSDES
KKPFLIQRRGAEFSLTTVAKHFGADFTTSLPYLWENTVGPLRMVVIENHQIDRQVQLERG
DTAAQELVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMAARCVGVLSK
IAMLETMNSFLECVLPWLAAIADCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPVLGRM
SDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQLLDGRKLEN
YKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDYYLRAQE
YAKTKAPDSSPLPSLVLCPPTLTGHWVDEVGKFCTKEYLNPLHYTGPPTERMRLQHQVKK
HNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRIILSGTP
IQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALHRQ
VLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSIANTAAEE
EKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRITEQLAGQSSNLRDLQHAPKLS
ALKQLLLDCGLGSGGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPSVTYLRL
DGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAM
DRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKISIANTVISQDNASLQSMGTDQLLNL
FSLDKGEKGEQSSATSGKTSMKSVLDGLGELWDQQQYDTEYNLDSFMHSLQ
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcaagactagatcgtttgtttatcttgcttgacaccgggacaacaccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccacatgaactc
aataacctcctatcaaaggttttgacctacctaagaagtcccaactgggacactcgaata
gcagcaggccaagctgttgaggccattgtaaagaatattcctgagtgggacccgacgccc
aagcctaaagaagagtccagtgaagacttgtctccagaagactcctcttgtgaccggttg
agtttctaccactttgacatctcccgccttctcaaacacggggcctctctgctgggatcc
gcgggggccgagtttgagctgcaggatgacgcaactggtgagattgaccctaaagaacgt
ctggcccgccagagaaagctccttcagaagaagctgggtctggacatgggcgccgctatc
ggcatcgacaccgaggagctgttcaacgatgaggacctggactgcacctgccaacccagt
gggcttagagctcatggaagcaaaggcacagctggatccagctcccacaaccacctgccc
attcaggctgctgacttgattgactccgagttccggccaggcatgagcagtcgtcagaag
aataaggctaagaggatggccaagctggtggccaaacaaagatccaaagacatggaacca
aatgaaaagagtaatgacagctttgagggggaacctgaagagaaacgaaggaaaaccacc
aacgttgtcattgatcaaccggcaacggagcataaagtcttaatagacaacgatccagaa
aacactggtcttttagaagaggagtggcctctggagagcttctgtgatgagctctgcaat
gacctcttcaatccgtcgtgggagattcgtcacggtgcaggcacaggtcttagagaaatc
cttaagtcccagggtgctgggggcgggaagctggtgggaagcactgcagagcagatgttg
cggcagcatcaggagtggatcgaggacctggtcatccgcctgctctgcgtcttcgctctg
gaccgctttggagactttgtatctgatgaggtggtggctccggtcagggagacgtgcgcc
cagacactcggtgtggcccttcgccacatgaacgaaactggcgtttccatgatagtagac
gttatgctgaagcttttaaaagaagaccagtgggaggtccgtcatgggggcctactcggg
atcaagtatgccctggctgtccgacaggacctgatctctgtcttcctgccccgggtgctc
cctgccatcactgtaggccttcaggacctggatgatgacgtcagggccgtggcagctgca
tccctcatccctgtggtggaaggcttgatgcagctactgcctaataaggtacccttcatc
gtgaacacgctgtgggatgctcttttggacctggacgacctcactgcttccaccaacagc
atcatgacgttgctgtcctcactgctcacctacccacaggtccgccagtgcagcatgcag
cagtcattaacagtcctggtccctcgagtttggccgtttttgagacacaccatatcatca
gtaagaagggcggcgctggaaaccctcttcacactgctgtctaaagctgacgagagctgt
gcaatgtggatcaaccccatcctacaagagatgctgcggcacatcttccagtcctgcata
ctggagagcaatgaggaaatccttgagctgattcaaaaggtgtggatggagctgctgtct
caggccccgcagcagtacgtggtagcagccagctgtccgtggatgggtgcctggctctgt
ctcatgatgcaggcctcacagattcccatagacattaacatgctagtggaagtgaaggcc
cgctgcaaggataaggctggtgcaaaggcacgtcaagggaccattcaggtgaaagagaca
actcaggagtatatagcaggtgcagagacggtgaccgacgacccactgacgagggactac
gtagtgatccgttctcgcctaatggctgccaaattgctgggggctctgtgtaggtgtatc
tgtgaccctcagctcaatgctgcgtctcaggagatccgaccagctgagtctttaggccag
ctgcttctcttccacctaaactccaagtctgccctgcagcgcatagctgtggctctggtg
ctttgcgagtgggccgcaatgcagaaggattgtcaggtggtgtcgttgatggtgcagcct
cgtcttctggccattctgtcagagcacctgtactacgatgagatcgccatccccttcacg
cgcatgcagaatgagtgcaaacagctcattgcgatgctagccgatgcccacatagacctg
caagaccgcctcaattgtagcgttttcacgattgatcaagccaatgatctggtaaccacc
atcttcacagagtcgacagcgggtctgaatgtgaactccaatcagtggcaggcactggac
ggtaaacgacagcaggcccaggcaacagtggcagagaccaacatcgactggcagcagctg
catctgcgcgtccacatggtcacagcgtgcgcagtgattaacctgcaggtgcttcctgaa
aagctcaacccactggtcaggcctctaatggagaccatcaagcgggaggaaaacaccctc
atccagggctatgctgcgtctttcatagccaagctgctgcagcagtgtgccagacgctcg
ccgtgccccaaccccaagatcattaaaaacctctgtgcctcggcctgcatggactcggcg
gtcactccctcgtctgcctgccccgttccccccacacaggaacatgccaaaggcagtggg
ttggagaaagattgcactcatcacatggtcaacaaaacccgaggcataatcaccctgtac
cgccaccaaagggcagcgtttgccatcaccagtaagagggggccagcccctaaagccccc
aaaaaccccaccacagagcttcctcctggcagcaccatctgcactgatagcgacgagagc
aagaagccgtttcttattcagaggcgaggggcagagttctccctgacaactgttgccaag
cactttggtgcagacttcaccacgtctctgccgtacttatgggagaatacagtgggacca
ctgaggatggtagtgattgaaaatcatcaaattgataggcaggtccagctggagagagga
gacactgcagctcaggaactggtcaactctctacaagtgctggaagtcatggctggggcc
atggctgctgaactcaagcctttgctgcttgagcacctcccccatctgttcacctgcctg
cagcacccgtacacagcggtgcgtcatatggccgcacgctgtgtcggcgtgctcagtaag
atagccatgctggagaccatgaacagtttcctagagtgtgtcctcccctggttagctgct
atcgccgactgcaccaaacaggagggtgccatcgaggctttggcctgtgtcatggagcag
cttgatgtggacattgtgccctacatcgtgctgctcgtagtgccggtgctgggccgcatg
agtgaccccagcgatagcattcggttcatggccacgcagtgctttgccacactcatccgc
ctgttgcccctcgaggcaggtataccggaccccccggccatgtccgctgatctgattcgc
cagaaggccagagaacgccacttcctggagcaactactagatggcagaaaattggagaac
tacaagatccctgttccaattaaggccgagctcaggaaataccagcaggatggagtgaac
tggctgtccttcctgaacaaatacaagctgcacgggatcctgtgtgacgacatgggcctc
ggcaagacgctgcagtccatctgcattctggcaggggattactacctcagggcacaggaa
tatgccaagactaaggccccagacagcagccccctgccctctctggtgctgtgtcctccc
acgctgactggccactgggtggacgaagtgggcaaattctgcaccaaagaatacctcaac
ccactgcactacactgggcctcctacagaacgaatgcggctgcagcaccaagtgaaaaaa
cacaatcttgtagtagcatcttatgacgttgtacggaatgacattgacttttttaggaat
atcaaattcaattactgtatcctcgatgagggtcatgtcatcaaaaacgggaaaaccaaa
ctttccaaagccattaagcagttggctgccaacttccgaatcatcttatcaggaacgccc
attcagaacaatgtcctggagctctggtctttgtttgactttctcatgccgggcttcctt
ggaacagaacgacagtttgccgctcgctatggtaaacccatcctggccagccgggatgcc
aaaagttcctcacgggagcaggaggcaggtgttctggcgatggaggccctacatcgacag
gtgctccctttccttctgaggaggatgaaggaggatgtcctccaggaccttcctcctaaa
ataattcaggactattactgcaacctgagtcctctacaggttcagttatatgaagacttt
gcaaagtctcgggccaaagccagtgtggaggacagcatcgctaataccgctgcagaagaa
gagaagcctaaactgaaggccacaggccatgtcttccaggctctgcagtacctgaggaag
ctgtgtaaccacccgagtttagtgttgactccgcagcatcccgagtacaaacgcatcact
gagcagctcgcaggtcagagctccaacctgcgggaccttcagcatgcgcccaaactctcc
gctctcaaacagttgctgttggactgcggtctaggaagcggtggaggatcagaggggggc
accgaggcagtcgtggcccagcatcgtgtgctcattttctgccagctcaagagtatgctg
gatattgtggagcacgatctcctgaaacccaaactgccctctgtcacctacctgaggctg
gatggcagtgtgccggccggcctgcgtcactccatcgtttccaggtttaacaacgaccca
tccatcgacgtgctgctgctgaccacccatgtcgggggtctgggtctgaacctgacggga
gccgataccgtggtgtttgtggaacacgactggaaccccatgagggaccttcaggccatg
gatcgcgcccataggataggacagaaacgggtcgtgaacgtgtacaggctgatcacacgg
ggcaccctggaggagaagatcatgggtctgcagaagttcaagataagcatcgccaacacc
gtcatcagccaagacaacgccagcctgcagagcatgggcacagaccagctcctcaacctc
ttcagtctcgacaagggagagaagggggagcagtcgtcggcgacctcaggaaagacatcc
atgaagtcggtgctggacggcctgggggagttatgggaccagcagcagtacgacacagag
tacaacctggacagcttcatgcactccctgcagtag
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integrated database retrieval system
