Cyclopterus lumpus (lumpfish): 117743843
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Entry
117743843 CDS
T09199
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117743843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117743843
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117743843
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117743843
NCBI-ProteinID:
XP_034407629
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Position
2:4658563..4662525
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AA seq
550 aa
AA seq
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MALNIPGLIMMIAFFLLVLGIGIWASVKSKKMEKNTQGGRLEVSFLANRSVSLVVGVFTM
TATWVGGAFIIGIAESVYDPTRGLIWALVPLQISISFIIGGLFFAKPMRENHYISMMDPF
QRKYGNKLTAVLAIIPLITEVFWIPPLLIALGATMSVVIDLPFSVCVWISAVVVIIYTVL
GGLYSVAYTDVIQISLVFLSLWLCVPFVLTSNVYTDITETAFNHTQQGSWLGQLESDEVW
RWIDHFLLMTFGNVAIQDFHQRTLSSSSTSTARIICFIAAGAVIIVGIPSVLIGAVAAST
DWNSTSYGSPSPYERGEAAMVLPITLQNLTPTYISAFGIGAVAAAAMSSADSFLLSATTI
FTTTIYQTIRSQASDKELQWVIRVSIVAAGLVGTSLTSLDYSVMIFWILGSDLTYTIIFP
QLVCVLFIRVSNGYGAAAGYVVGVVMRVLCGEPLFGLPVILHFPGCTLENGVYVQRFPFK
SICMLSALASILVVSYVASLLFNKGIFPERWDVFKVKSQEAPPPADGAREADRKKAAADS
EHESMLDTGC
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatataccaggtctgataatgatgatagcattcttcctgcttgtgttggga
atcggcatctgggcctctgtaaagtctaagaagatggagaaaaacacacaaggtggacgg
ctggaggtttcttttttggcgaaccggagtgtcagcttggtagtgggagtcttcacgatg
actgctacttgggttggaggtgccttcatcattggtattgcagagtctgtctatgacccc
accagaggtctaatctgggcccttgttcctctgcaaatttccatttcctttatcatcggt
ggactgttctttgcaaagccaatgagggagaaccattacatcagtatgatggatcccttt
cagaggaagtatggaaacaaactgactgcggttcttgccatcattcctctcataactgaa
gttttctggattcctccattactgattgccttgggagccaccatgagtgtagttatagat
ctgcccttcagtgtttgcgtctggatctctgctgtggtggtgatcatctacactgttctt
ggaggtctctactcagtggcttacactgacgtcatccagatctcactggtgtttctgagc
ttgtggctgtgtgtccctttcgttctgaccagtaacgtttatactgacatcactgaaaca
gcattcaaccacacacaacagggctcctggcttggccagcttgagtctgatgaagtctgg
agatggattgatcattttctactgatgacttttggaaatgtggccattcaggatttccat
cagaggacactgtcctccagctccacgtctacagccaggatcatctgtttcatagcagca
ggagcagtaatcattgtaggaatcccatctgtgctgattggagccgtagcagcttcaaca
gactggaactccacctcatatggctctccttctccatacgagcgaggggaggcagccatg
gtgttgcccatcacccttcagaatttaaccccaacctacatttctgcctttggcattgga
gctgttgctgctgctgcgatgtcatcagctgactctttccttttgtctgcaaccaccatc
ttcaccaccaccatctaccagaccatcaggagtcaggcatccgataaagagctgcagtgg
gtgattcgtgtctccatagtggctgcaggacttgtgggaacatccctcacctctctggac
tacagtgtcatgattttctggatcctgggctcagacctgacttacaccattattttcccc
cagctggtctgcgtcctcttcatcagggtttccaacggttatggggctgctgcaggctat
gttgttggagtggtgatgagagttttgtgtggagagccgttgtttggcctgcctgtgatc
ctacatttcccaggatgcactttagagaacggtgtttatgttcagcgctttcctttcaag
tccatctgcatgctgtctgctctggcctccatcttggtggtttcatatgtggcctcactc
ctgtttaacaagggtatctttcctgagaggtgggacgtgttcaaggtgaagtcacaggaa
gcaccaccaccagcagatggagccagagaggctgatcgtaaaaaggctgctgctgattct
gaacatgaatcgatgctcgatacaggttgctga
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