Cyclopterus lumpus (lumpfish): 117743876
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Entry
117743876 CDS
T09199
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117743876 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117743876 (kcnma1a)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117743876 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
117743876
NCBI-ProteinID:
XP_034407689
Ensembl:
ENSCLMG00005013851
LinkDB
All DBs
Position
15:complement(10798058..10920355)
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AA seq
1199 aa
AA seq
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MLAEAGGTVPHGSDSSMRTSNINNNRNPDSSILISKMVDVVIPFSSEVPCDNNGQRMWWA
FLASSMVTFFGGLFIILLWRTLKYMWTVCCHCNVKPKEVQKVINNPTADKPKGDEKEGVP
ISEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQHFYED
FTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLR
FLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQ
NSQPLSYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIG
NRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLEL
EALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISI
KNYHPKIRIITQMLQYHNKAHLLNIPSWNWREGDDAICLAELKAGFIAQSCLAQGLSTML
ANLFSMRSFIEIEEDTWQKYYLEGVANEMYTEYLSSAFVGLTFPTVCELCYVKLKLLLIA
IEYKSEQRESSILINPGNHVKLQEGTLGFFIASDAKEVKRAFFYCKACHDDITDAKRIKK
CGCKRLEDEHPSTLSPKKKQRNGGMRNSPNSSPKMMSRHDPLLVPGNEQIESVDMSVKRY
DSTGMFHWCPSKDIEKVILTRSEASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNF
HYHELKPIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSAN
QNNIEDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDSSPVHGFVR
QASVTTGSNIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSA
TYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLALYDGP
FADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNAPSPCTKRYVITNPPYEFELVPT
DLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIPPSNRQNRSSKTRESRDKQN
ATRMNRMGQEKKWFTDEPENAYPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgctagcggaggcaggtggcaccgttccccatggaagcgacagctctatgaggacaagc
aatatcaataataatcgaaatccggactcttcaatcctaatatccaagatggtagacgtt
gtcatcccgttctcgtctgaggtgccctgcgacaataatggacagcgcatgtggtgggct
ttccttgcctcctccatggtgacgttttttgggggtctcttcatcatcctgctgtggagg
acactcaaatatatgtggacagtttgctgccactgcaacgtcaaacccaaggaagttcag
aaggtgatcaacaatccgacagcagataaaccaaagggcgatgagaaggagggggtccca
atcagcgaggtgggatggatgacttcagtcaaagactgggccggcgtcatgatctccgct
cagacactcactggcagagttctggtggtgttagtctttgcgctcagcatcggggccctt
ggaatatacttcatagactcctcagatccaatagaatcctgccagcacttctatgaagat
ttcacgttacaaatcgatatggccttcaacgtcttcttccttctgtattttggcttgcgg
tttatagcagccaatgataagctgtggttctggctggaggtcaactcagtggtcgacttc
ttcactgttcctcccgtgtttgtttctgtttacttaaacagaagctggctcggcttaaga
tttctcagagcactaagattgatacagttttcggaaattcttcagtttttgaatatcctg
aaaacaagcaactccatcaagctagtgaacctgtgttccatcttcataagcacatggctc
acagcagctggattcatacatttggtggaaaactcaggggatccttgggaaaacttccag
aattcccagccactttcctattgggaatgtgtctacttgctgatggtgacaatgtctaca
gtgggctacggggatgtctatgcaaaaaccaccctggggcgcctgtttatggtcttcttc
atccttggtggtttggccatgtttgccagctacgtccctgaaatcatagagttaatagga
aaccgaaagaaatatggtggttcctatagtgcggttaatgggagaaagcatattgtggtc
tgtggtcatattaccctcgaaagtgtctccaacttcctcaaagacttcctacacaaggac
agggatgatgtcaatgttgaaattgtttttctccataatatttcccctaatcttgagctg
gaagccttgttcaaacgccattttacccaagtagagttctaccagggatctgttctcaac
cctcacgacctcgccagagtgaagatcgagtcagcagatgcctgcttaatcctagccaat
aagtactgtgcagatcctgatgctgaagatgcctccaacatcatgagggttatttcgatc
aagaactaccatcccaagatcagaataattacacagatgctacagtaccacaacaaggcc
catctgctgaacattccaagctggaactggagggagggtgacgatgctatctgtctggct
gagctgaaggcaggcttcattgcccagagctgtctggctcagggcctgtccaccatgcta
gccaacctcttctctatgaggtccttcattgagattgaggaggatacatggcagaagtat
tacctagaaggggtggctaatgagatgtacacagagtatttgtccagtgcctttgtcggc
ctcaccttccccactgtctgtgagctgtgttacgtgaagttgaagctgctacttattgcg
atcgaatacaagtcggagcaaagagaaagcagcatcctcatcaacccgggtaaccatgtc
aagttgcaggaaggaacgctgggattttttatcgccagtgatgccaaggaagtgaagaga
gcatttttctactgcaaagcttgtcatgacgacatcacagacgctaagcggatcaagaag
tgtggctgcaaacgactcgaagacgagcatccatccacactctcgcccaaaaaaaagcag
cgcaacggagggatgcgaaactcacccaactcctcgcccaaaatgatgagtcgacacgac
ccgcttctcgttcctggaaatgaacaaatcgagagcgtggacatgagcgtgaagaggtat
gactcgacagggatgtttcactggtgcccatcaaaagacatcgaaaaagtaatcctgacc
cggagtgaagcctccatgacagtactgagcggccatgtggtggtctgtatatttggggat
gtcacgtccgctttggtggggctgcgaaacttggtgatgcctttaagagccagcaatttc
cattaccacgagctaaagccgattgtttttgtgggctcgctggaatacctgcgcagagag
tgggagactttacacaacttccccaaggtctccatcttacctggtacgccattaagtcgg
gcagatttaagggctgtcaacatcaacctctgcgacatgtgcgtaatactgtcagccaat
cagaacaatatcgaagatacctcactgcaggataaggaatgcatcttggcatcgctcaac
atcaaatctatgcagtttgatgacagcattggggtcttacaggcaaattcacaaggtttc
acgcctcctggaatggaccggtcatctccagacagcagtccagtacatggctttgtgcgt
caggcttctgtcaccaccggatccaacatccccatcatcacagaactagtgaacgactca
aacgttcagttcctggaccaagatgatgatgacgacccagacacagagctgtacctcact
cagcccttcgcctgcggcaccgcctttgctgtcagtgtactcgactccctgatgagtgca
acatacttcaatgataacatcctcacgctgattcggacactggttacagggggagccaca
ccagagctggaggccctgttggctgaggagaacgccctcagaggcggctacagcacacct
cagacactggcaaatagagacaggtgtcgcgtcgcccagctagccctctacgacgggcca
tttgccgacttgggggacggaggatgctacggggatttattctgtaaagcactgaagacc
tacaacatgttgtgttttggaatctacagattaagagacgctcacctaaatgcaccgagc
ccgtgtacaaaacggtatgtgatcacgaacccaccctatgagtttgagctcgtgcccaca
gacctgatcttctgcctcatgcagtttgaccacaatgcaggccagtcccggacaagcttg
tcccactcttcccattcctcccattcctccagcaaaaagagctcctccgtccactcaatc
ccgccctccaaccggcagaatcgcagcagtaagacccgggagtcccgcgataaacagaat
gcaacaaggatgaatagaatgggccaagaaaagaaatggtttacagatgaaccagaaaat
gcctaccctcggaacattcagatcaagcccatgagcactcacatggccaaccaagtcaac
caatacaaatccactagtagtctgattccgccaatcagagaagttgaagatgaatgctga
DBGET
integrated database retrieval system
