Cyclopterus lumpus (lumpfish): 117743947
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Entry
117743947 CDS
T09199
Name
(RefSeq) protein SON isoform X1
KO
K23718
protein SON
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117743947
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
117743947
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
dsrm
DND1_DSRM
RSRP
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117743947
NCBI-ProteinID:
XP_034407829
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Position
2:12269181..12292674
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AA seq
928 aa
AA seq
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MAANIEQIFQDFILNKIREIEDQNEDKPAAGEEAAAFETVEAEEATSDRKKQEDVRTSGS
LRKHRKHKKHKSKKKRRNREKESSSESGAEDAGPQHQSRGGTPTEPNQEQVCVSTRAAAL
LLNPPCCSTVCPGVDDDSKSRCHKRHSTAKRKKKKKRKKGEESSSDCDSEFVSKQKERKS
GQSSSPRRREELPDIIPKQDSSNKGRDEERSARSRSPSCLVGRSSRPRHPHRRSSSSEKR
AAFEESIQSTQSPAKGLQPPQLQSHDQRGPPPQNKEDPTQRLGSGAPQSMLDQSISTRPT
PPQLKAPHRPHEEAKKKSPQRKKEAKASKRQKRSKSPCRSHRRGSRSRSRSRSRSPSKKK
RSRSRSGGRRSRRSRSRSVSHGRRRATFSQRDRWKREPSHSPVLILRKNRSPSRKLCSLS
TSPQRISELDKDQLLEIAKANAAAMCAKAGMPIPASLRSTALPMALPSMAMNAAMASMTA
ATMTAALSNMGMSSLLPLPSITNKPPPVSSQPNIALEEVKRKVAKQANSISIKEFTDKCK
MIVDSKGELPVAMPHVSDEEDDGKPFGGSALREQKAISFSINNTTVRPAVRSDAGMAKEF
PVSSGCQHRKKEGDALGAYGEWVPVDKTADKAASRKIATTVPIATAMSSSGETMTTPVLP
EVVEQPDGEPDNDSVFPDPLLQPVDISQAVTERIKAQRRLAENPYDVNAICMLSRAQEQV
DAWAQSNTVPGLFTGSTGAQVLSSEELSTSGPQAWLKKDQFLRAAPVSGGVGEFLMRKMG
WKTGEGLGRNREGTVEPIVIDFKVDRKGLVAEGEKTQKQTGGLVVTKDLMGKHPVSALIE
LCNKRRIIQPDFVMVHHSGPDHRKNFLFKVTVNGVDHQPQTASPNKKLAKAMAATVALQA
LGEVPVDGPGLYTGPVFTAASTGPLFST
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatagaacagattttccaagactttatattgaataagatcagagagatc
gaagaccagaatgaagacaaaccagctgctggagaagaggccgccgcctttgagacggtt
gaagcggaagaagcgacttcagacagaaagaagcaggaagacgtcaggaccagcggctca
ctgaggaaacaccggaagcacaagaaacacaaaagtaagaagaagaggaggaaccgagag
aaggagagcagttcagagtccggagcagaggacgccggaccccagcaccagtccagagga
ggaacgcccaccgagcccaaccaggaacaagtgtgtgtgagtacacgagctgcagctctt
ctgttgaacccaccatgctgctccactgtgtgtccaggtgtggacgacgacagtaagtcc
agatgccacaagcggcattcaacagcaaagaggaagaagaagaagaaaaggaagaaaggt
gaagagagctcgtcagattgcgactcagagtttgtgtcaaagcagaaggagaggaagagc
ggtcagagctcatcgccacggcgacgagaggagctgcctgatatcatccctaaacaggac
agctccaataagggaagagatgaagagcggagcgctcgatcccgctctccttcctgttta
gtggggaggagctctcggcctagacacccccaccggagatccagctcctcagagaaaagg
gcggcttttgaggaatccatacagtccacccaaagtcctgcaaaaggcctgcagcccccc
cagctgcagagccatgaccagagaggaccgcccccccagaacaaagaggaccccacacaa
cgactaggttctggtgcaccccagtccatgctggatcagtccatatctactaggcccacc
ccccctcagctcaaagcaccacacaggcctcatgaagaagccaagaagaagtccccacag
aggaagaaagaagcaaaggcatcaaagaggcagaaaagatccaagtcaccatgtaggagc
cacaggagggggtccaggtccaggtccaggtccaggtccaggagtccttcgaagaagaag
aggtcccggtccaggtcagggggccggcgctcgcggaggtctcgctcacgttcggtgtca
catggtcggaggagggccacattcagccaaagggaccgctggaaacgagagccaagccac
tcccctgtactcatcctccgcaaaaacagatcccccagtcggaaactgtgcagtttgagt
accagccctcaacgcatcagcgaactggataaggaccagttgctggaaattgccaaggcc
aatgctgctgccatgtgtgccaaagcaggcatgcccatcccagccagcctgaggtccaca
gcgctccccatggctctgcccagcatggccatgaatgctgctatggccagtatgacggct
gccaccatgacagcggccttgtctaacatgggcatgtcttcactgctcccactgccttcc
attaccaacaagccgccgccggtctcctcccaacccaacattgctttggaggaagtgaag
aggaaagtagcgaagcaggccaacagcatcagcatcaaggagtttacagataaatgcaag
atgattgtggacagcaaaggagagctgccggtggcgatgcctcatgtttcagacgaagag
gacgatgggaaaccttttggaggatccgctcttcgggagcaaaaagccatcagcttcagc
atcaataacaccacagttcgtccagcggtgcggagcgacgcaggcatggccaaagagttc
cccgtgtcgtcaggatgccaacatcgcaaaaaggagggcgatgctctgggtgcctatgga
gaatgggttccggtggacaaaacagcagacaaagctgcctccagaaagatcgccaccact
gttcccatagcaacagccatgtcatcatcaggtgaaaccatgacgacaccagtgttacca
gaggttgtcgagcagccagatggagagccggataatgacagcgtttttcctgacccacta
ctgcagccagtagatatctctcaggccgtcactgagagaatcaaagctcagaggcgattg
gctgagaacccctatgacgtcaatgccatctgcatgctcagccgggcacaggagcaggtg
gatgcgtgggcccaatccaacactgttcctggccttttcactggttccactggagcccag
gtcctcagctcggaggagctttccaccagcggaccacaagcatggctgaagaaggaccag
ttcctcagagcagctccagtgtcagggggcgtcggggagttcctgatgaggaagatgggc
tggaagacaggggagggcctagggaggaaccgcgagggtaccgtggagcccatcgttatt
gacttcaaggttgatcgcaaaggactagtcgctgaaggagagaagacccagaagcagacg
ggaggactggtggtaaccaaagatctgatggggaagcacccggtgtctgctctcatcgag
ctgtgcaacaagagacggatcatacagccggacttcgtaatggttcatcacagcggtcca
gaccaccgcaagaatttcctcttcaaggtcactgtgaatggcgtggaccaccagccacag
acagctagtcccaataagaaactcgccaaggccatggcagccacggttgcactgcaggct
ctgggagaggttcctgtcgatggaccaggactctacactggtcccgtcttcactgctgcg
tctactgggcccctgttctcgacatag
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