KEGG   Cyclopterus lumpus (lumpfish): 117743952
Entry
117743952         CDS       T09199                                 
Name
(RefSeq) vinculin-like isoform X1
  KO
K05700  vinculin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04520  Adherens junction
clum04810  Regulation of actin cytoskeleton
clum04820  Cytoskeleton in muscle cells
clum05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117743952
   04520 Adherens junction
    117743952
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117743952
   04810 Regulation of actin cytoskeleton
    117743952
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    117743952
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:clum04812]
    117743952
   04147 Exosome [BR:clum04147]
    117743952
Cytoskeleton proteins [BR:clum04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     117743952
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117743952
SSDB
Motif
Pfam: Vinculin Talin_IBS2B STX6_10_61_N
Other DBs
NCBI-GeneID: 117743952
NCBI-ProteinID: XP_034407830
Ensembl: ENSCLMG00005019438
LinkDB
Position
15:complement(12425645..12449121)
AA seq 1066 aa
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVNSMNTVKELLPVLISAIKIFVATKSSRGAGVEEAERNRRFIFEKMSAE
INEIIRVLQLTTWDEDAWANKDMEALKRCLALIESKMAQAKGWLKDLHGQPGDPGEVALR
VILDEAGKVGELCAGKERKDILATSKALGIMTDQIADLRARGQGPTPGCVQRAGQCSQGL
DLLFGKVDSAARRLEALINAKQAIARRLDAAQTWLANPNGGPEGEENIRALLAEAKRIAD
LCEDPKERDDILRSISEIAGLTARLVELRRQGKGDSPESRALAKQIGSALLTLQSKTNRA
VANMRPTKPAVTLEGKMEQALSWVNNPGVDDRGVGQAAIRGMVGEGRRLAGGLLGPYRQD
LIGRCDRTEALMTSLADMAGRGEAEAPHARATAARLQDSLKDLRQHMQEVMTQEVSDVFS
DTTTPIKLLAVAATAPPDTPNRGEVFEERAGNFEAHGGRLGATAEKAAAVGAANKSTVEG
IHAAVKHARELTPQVTSAARILLKNPGNKAAYEHFDTMKNQWIDNVEKLTGLVDEAINTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKNASDLLSHTISPMVMDAKAVAGNIQDNALQKAYLDSCLRILAAVGKVREAFQPQEP
DFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMMV
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRAMIQCAKDIAKASDE
VTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDSGCTLRWVRKTPWYQ
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggtaaagccatcccagatctg
acggtgccggtggccgcggtgcaggcggcagtcagcaaccttgtacgggtgggcaaggag
accgttcaaaccaccgaggaccaggtgatgaagcgagacatgcctcctgcgttcattaag
gtggagaattcgagctctaagctcgtccaggcagctcaaatgctaaaggcagatccatac
tctgttcctgcacgagattacctgatcgatggatccagagggatactgtctggaacatcc
gacctgctccttacctttgatgaagcagaggtgcgtaagatcattcgtgtgtgtaaaggt
atcttagagtaccttgcagtagctgaggtggtggagaccatggaggaccttatcacttac
accaagaacctgggaccagggatgactaaaatgtcaaagatgattgaggagaggcagcag
gagctgacgcaccaagaacacagacaaatgcttgtcaactccatgaacactgtcaaagag
ctgctgcctgttcttatatcagctataaagatttttgtcgcaaccaagagcagtcgaggt
gccggcgttgaggaggcagagaggaaccgaaggtttatctttgaaaagatgagcgctgaa
atcaacgagatcataagagtcttacagctcaccacgtgggatgaagacgcctgggccaat
aaagatatggaggctttgaagagatgtctggctttgattgagtcaaagatggcacaagct
aaaggctggctcaaagacctccatggacaaccaggagaccccggtgaggtggccctgcgt
gtgatactggatgaagctggtaaggtgggagagctgtgtgctgggaaggaaaggaaagat
attctggcaaccagtaaggctctgggaataatgactgaccagattgctgatctacgagcc
agaggccagggtccgaccccgggctgtgtgcagcgtgccggccagtgctcacagggctta
gacttgttgtttggtaaagtggacagtgctgctcgcagactggaggctctaatcaatgcc
aagcaggccatcgccaggaggctggacgctgcgcagacctggctggctaatcctaatggt
ggtcctgagggagaggagaacatcagagcgctactagcagaggccaagcgcatcgctgat
ctatgtgaagaccccaaagagagggatgacatcctgcgctccatcagtgagatcgcaggc
ctcactgccagacttgtggagctacgcagacagggtaaaggtgacagcccagaatcccgt
gcattggccaagcagattgggtccgcgctgttgaccctgcagtccaaaaccaaccgggcc
gtggccaacatgagaccaacaaaacctgccgtgactttggagggcaagatggagcaggcc
ctcagctgggtgaacaaccctggagtggacgacagaggagtaggtcaggcagcaatcaga
ggaatggttggagaagggaggaggctagcaggaggcctgttaggcccgtatcggcaggat
ttgattggacgctgcgaccgaacagaggctcttatgacatctttggcagacatggccggc
aggggcgaggctgaggcccctcatgcacgagctacagccgcacgactgcaggatagccta
aaggacctgaggcagcacatgcaggaggtgatgacccaggaagtatctgacgttttcagt
gacaccactacccctatcaaactgctagctgtggctgcaactgctccacctgacaccccc
aacagaggggaggtatttgaagagcgtgcagggaacttcgaggcccacggaggtcggctg
ggggcgactgcagagaaggctgctgccgtgggagcggccaataaaagtacagtagagggg
atacatgctgctgtgaaacatgccagggagctcacaccacaggtgacctctgctgctcgg
atcttgttgaagaatcctggaaataaagcagcatacgagcactttgacaccatgaaaaac
cagtggattgacaatgtggagaaactcactggtctggtggatgaagccatcaacaccaaa
tctctgttagatgcctctgaggaggctataaagaaagacatcgacaagtgccgagttgcc
atggcaaacgttcagcctcaaatgcttgttgccggggcaacgagcatagcaagacgagct
aatcgggtcctgttggtggctaagagggaagtggagaactctgaggatccgcggttcaga
gacacagtgaaaaatgcatcagacctcctctcccacaccatctcacccatggtgatggat
gccaaagcagtggctggaaacatacaggacaacgctctgcaaaaggcctatttggactca
tgtctgaggatcctggctgcagtcggcaaagttagagaagccttccaacctcaggagcct
gactttcctcctccaccacctgacctggaccagctccatgttagtgatgagcaggctcca
cccaagccccccttgccagagggtgaggtgcccccgcctcgtccccctcctccagaggag
aaggatgaggagttcccagagcagaaggctggagaggtgctcagcgagcctatgatggtg
gccgccaggcagctgcacgatgaggcacgcaagtggtcaagcaagggtaacgacatcata
gcagcagccaagcggatggctctgctaatggcagaaatgtctcggctggttcgtggtgga
agcgggaacaagcgagcgatgattcagtgtgctaaggacatcgccaaggcctcagatgag
gtgacgagactggctaaagaagtggccaagcagtgcactgatagacgcatcagaactaac
ctgctgcaggtgtgtgaacgaatccctaccataagtactcagctgaagatcctctcgact
gtcaaagcgacaatgctgggacgaacaaacattagtgaagaggagtcggagcaggccaca
gagatgttggtccataacgcccagaatctgatgcagtcagtgaaggagaccgtcagagaa
gcagaagcagcctcaatcaagatccgcacagattcaggatgcacccttcgctgggtgcgt
aagaccccctggtaccaataa

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