Cyclopterus lumpus (lumpfish): 117743963
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Entry
117743963 CDS
T09199
Symbol
lhcgr
Name
(RefSeq) LOW QUALITY PROTEIN: lutropin-choriogonadotropic hormone receptor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04080
Neuroactive ligand-receptor interaction
clum04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117743963 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117743963 (lhcgr)
04081 Hormone signaling
117743963 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clum04030
]
117743963 (lhcgr)
G protein-coupled receptors [BR:
clum04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
117743963 (lhcgr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_RPS2
DUF5368
Comm
Motif
Other DBs
NCBI-GeneID:
117743963
NCBI-ProteinID:
XP_034407856
Ensembl:
ENSCLMG00005003605
LinkDB
All DBs
Position
15:15234927..15244598
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AA seq
699 aa
AA seq
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MKAAVDPVESTVSSPVSRMAPRAVRLLVSLCAVLNVRSCRAYTCPAICSCGADAFQCSRD
TQLASRARATSNRLWLMHLPLKEVPTHAFKELIDITVIEISQSNCITRINRHAFLSLHSL
AKISVQNINSLRVIEKGAFTDLPKLEYLSISNTGLIHFPDFTTISSLVPNVILEMADNMR
IDIIPANSFQGITEKSVDMNLFRNGFKKIKSHAFNGTKLSTLILRDNWYLSEIEEDAFEG
ATGPSSLDVSSTALSSLPPTGLRQVRFLKARFAFALKTLPPLESLAELLEAELEYPSHCC
AFHTSRRKQRESALKNFTKLCDLNDTELEPTADGEDLVDYNNFQYPDLEFDCLKSPLVKC
TPKTDAFNPCEDLLGFPFLRCLTWIITVFAVIGNLAVLAMLLISHHKLTISRFLMCNLAF
ADLCMGLYLMLIAFMDHLSRHEYYNHATDWQTGPGCGIAGFLTVFASELSLYTLTVISLE
RWHTITNAMHVNKRLRMHHVAAIMGAGWAFSLLVALLPLVGVSSYSKVSICLPMDIDTLG
SQLYVVAVLILNVVAFLVVCSCYISIYVSVHNPEHSTRHGDTKIAKRMAVLIFTDFVCMA
PISFFAISAALRVPLITVSHSKILLIVFYPINSLCNPFLYTLFTRAFRKDVCQLLSRCSC
CHANTDFYRSQTLASHLNSTQKTPDKNLTRLASMPITLR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcagtggatccagttgagagcacagtgagtagcccggtgtcacgcatggct
ccccgggcggtccggctcctggtctctctgtgcgctgtcctgaatgtgcgctcgtgccgc
gcgtacacctgtccggccatctgtagctgcggcgccgacgcgtttcagtgcagcagagac
acccagctggcctctcgggcacgagcaacaagtaaccgactatggcttatgcatctgccc
ttgaaagaagtccccactcatgccttcaaggagctcatcgacattacagtaatagagatc
tcccagagcaactgcatcacacggataaatagacatgccttcctctccctccacagcctg
gctaaaatttctgtgcagaacatcaacagtctgagggttattgaaaaaggtgccttcact
gacctccccaagctggaatatttgagcatctccaacacggggctaatacacttcccagac
ttcacaacaatctcttccctggtgccaaatgttatcctagaaatggccgacaacatgagg
attgacatcattcctgccaattctttccagggtataacagagaagtctgttgacatgaac
ctgttcagaaacggcttcaagaaaatcaaatctcatgcattcaatggaaccaagctcagc
acactgattttgagagacaactggtatctcagtgagattgaagaagacgcttttgaagga
gccacaggtccgagttctctggatgtttcctccactgctctgagctcgctcccccctact
ggattgaggcaggtgaggtttctgaaagcaagatttgcctttgctctgaaaaccctccct
ccactggagagcctggctgagctgctggaggccgaacttgagtaccccagccactgctgt
gccttccacacatcgcgccggaaacaaagggaaagtgccttaaagaacttcacaaagttg
tgtgatctcaacgatactgaattagagcccactgcagatggcgaggaccttgtcgattac
aacaactttcagtacccggacctggaatttgattgtcttaaaagccccttggtcaagtgc
acgccaaagacagatgccttcaacccctgtgaggacctgctgggctttcccttcctgcgc
tgtctcacctggataatcaccgtgttcgctgtgatcggtaacctggctgttctggctatg
ctgctaattagccaccacaagctaaccatctccaggttcctcatgtgtaacctggccttc
gctgacctgtgcatgggactctacctgatgctcattgccttcatggatcacctctcccgt
cacgagtattacaaccacgccacggactggcagacagggcccggatgtggcatagcaggg
ttcttgacggtgttcgccagcgagctatcgttgtatacactgactgtaattagcctcgaa
cgctggcacaccatcaccaatgccatgcatgtcaacaagaggctgcggatgcaccacgtg
gcggccataatgggggcgggctgggccttctctctgctggtcgccctgctccctctggtg
ggggtcagcagctacagcaaagtgagcatctgtctgcccatggacatcgacacgctgggc
tctcagttgtatgtggtggctgtgctcatcctcaacgttgtcgctttcctggtggtctgc
tcctgttacataagcatatatgtgagtgttcacaacccagagcactctacccgtcatggc
gacaccaagattgccaagcgcatggctgtgctcattttcacagactttgtgtgcatggcc
ccgatctccttcttcgccatctccgcagccctccgtgtgcccctcataaccgtgtctcac
tctaagattctgctcatcgtgttttatcccatcaactccctgtgcaaccctttcttgtac
accctcttcacgcgggcttttaggaaggacgtgtgccagctgctgagtcgctgcagctgc
tgccatgccaacacggacttctacaggtcacagactctggcttcacacctcaactcgacc
caaaaaactcccgacaaaaacctcactcgcttagcttctatgcctatcacattaagatga
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