Cyclopterus lumpus (lumpfish): 117743971
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Entry
117743971 CDS
T09199
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117743971
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117743971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117743971
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117743971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117743971
NCBI-ProteinID:
XP_034407872
Ensembl:
ENSCLMG00005005769
LinkDB
All DBs
Position
15:3752183..3762153
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AA seq
459 aa
AA seq
DB search
MNLSTAQMSLAWILAVLAGPAFCSEEEQNLVKKLFTGYNKVVRPVNHFSDAVVVTVGLQL
IQLISVDEVNQIVTSNVRVKQQWMDVNLNWNPDEYGGIRKIRVPSADIWKPDLVLYNNAD
GDFAIIHQTKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGLLVV
INPDNDRPDLSNFMESGEWVLKDYRSWKHWVYYTCCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIIITVIVINTHHRSPSTHTMPGWIRKVFIETIPNMMFFSTMKRPGQEIR
QKRMFPTDMDISDISGNPTPTSVTYQSPIAKNPDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTLAVFAGRLIELNTL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctctacggcccagatgtcgctggcatggatcctcgctgtacttgccggtccg
gcgttctgctcggaggaggagcagaacctggtgaagaagctgttcaccggctacaacaag
gtggtccgtcccgtgaaccacttcagtgacgccgtggtggtcaccgtgggactgcagctg
atccagctcatcagtgtggatgaagtgaaccagatcgtgacgagtaatgttcgtgtcaaa
cagcaatggatggacgtgaacctgaactggaatccggatgaatacggaggcatccggaag
atcagagtcccttcagccgacatatggaaaccagacctggtgctttacaacaacgccgac
ggcgactttgccatcatccaccaaaccaaagtgctgttggagcacaccgggatgatcacg
tggaaccctccggccatctttaagagctactgcgagatcatcgtcctccacttcccattc
gacctgcagaactgcagcatgaagctggggacgtggacgtacgatggactgctggtcgtc
atcaatccagacaacgatcggcccgacctcagcaacttcatggagtccggcgaatgggtg
ctgaaggactacaggagctggaaacactgggtttactacacctgctgccccgacacgccg
tacctggacatcacctaccacttcctgatgctgcgcctgcctctctacttcatcgtcaac
gtcatcatcccctgcatgctcttctccttcctcaccgggctggtcttctacctgcccacc
gactccggtgagaagatgaccctctccatctccgtcctgttgtccctgaccgtcttcctg
ctggtcatcgtggagctcatcccctccacctccagcgccgtgcccctcatcgggaagtac
atgctcttcaccatggtgttcgtcatcgcctccatcatcatcaccgtcatcgtcatcaac
acgcaccaccgctcgcccagcacgcacaccatgcccggatggatacgcaaggtcttcatc
gaaaccatccccaacatgatgttcttctcgacgatgaagcgtcccgggcaggagatccgg
cagaagaggatgttcccgaccgacatggacatctccgacatctcaggtaaccccaccccc
accagtgtcacctaccagtctcccattgccaaaaacccggatgttcgcagcgccatcgaa
ggcgtgaagtacatcgctgagaccatgaagtcagacgaggaatctaacaatgcggcggag
gagtggaagttcgtcgccatggttttggaccacatcctgctctgcgtgttcatggccgtg
tgcatcatcgggacgctcgccgtcttcgccgggaggctcatcgagctcaacacgctgtag
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