Cyclopterus lumpus (lumpfish): 117743979
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Entry
117743979 CDS
T09199
Symbol
rrbp1a
Name
(RefSeq) ribosome-binding protein 1a isoform X1
KO
K14000
ribosome-binding protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117743979 (rrbp1a)
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Gene cluster
GFIT
Motif
Pfam:
Rib_recp_KP_reg
GAS
Anp1
LMBR1
Motif
Other DBs
NCBI-GeneID:
117743979
NCBI-ProteinID:
XP_034407894
Ensembl:
ENSCLMG00005018572
LinkDB
All DBs
Position
15:complement(15963173..15975758)
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AA seq
1172 aa
AA seq
DB search
MDIYDPQTLGIMVFGGFMVISALGIALVSTFSMKETSYEEALAKQRRELGKIQTTRSDKK
KKDKVSEKKGRGKKREEKPNGQIPESEEIQEEVEAETVIESAAAPAVAAAPAPEPVADLD
VKPTAAPAGAELKNAAQPSPALSEPSPAPSPKEKKKKKVAKVEPASFQTAPLVAATAPVK
SSTVPASTQAPMSAPTKATAPSSESAPAPAKSAPAPAKSAPAPAKSAPAPAKSAPAPAKS
APAPTKSAPAPAKSAPAPTKSAPAPAKSAPAPAKSAPAPAKSAPAPAKSAPAPAKSAPAP
AKSAPAPAKSAAAPAKSSPALSKSAPVLEAVTKDVPVMAVPPVGSQQTPAVAGKVQEPKK
KASKKKTEPVAAVDSADAPLYLPYKALVSTISSMVFSEVEAHRLIEILSEKVGIIQDTWH
KATQKGDPVAMLKKQLEEREKQLAAEQEDASAAKNRLRELTKELSAEKSKVASVETRLSS
QLSKREQEMIALQARMQASYQDHVAQTQGFNAKIVSLQDQLEKGPNAQLARLQQENSILR
DALNQATSQAESKQNAELAKLRQECTKLTKELGEKTEGLLADEHIRKGLEAKLSATEKQL
SLLQASHGESEQALQRRMEEVCEELRATQSQNGSLQATLDNTQQDSSALSEYQVRIGRLE
ADISERSAQVDALTAQLEEIQTEKSQLVQQVASINSLLEANQTKKEDHNDQVHAAEVEEL
KLSLQERTNQLNTFQEELKQLQLKQEAADNTIVELEERNKSEDVTLITSLQDELKNLKEE
FEQLNNTPQSDTSTELGLLQRSLTEKDVLVTSLQEELREVGEKMATDAQSVTAELTAFQS
ETKETLQTLFPQIPVEMEQSNWLQVFTQKAQENLSQQSQESGSSTVLPELLGKLKEAEES
HGSLQAECEQYRIVLAETEGMLKHLQKSVEEEEVVWKSKMTNSEEQLSVALEKVSKLEAE
NQSVEKLKEQMMLLEAQLEKQSDHQETSEEMEQEHAQVKLQLLECQSQLDLAQKEAQAHK
EELSQVREQLGEITMQAQREQNGPAEAQPSQFQNELSQTTEKLHGEVAQRQQLSEEFEQA
QKTITELQAQLDLLNVSAGSPQADTEDVPQLQERLEKEKKLSKDLGQAATKLQQLLKATQ
EQLTKERDTVRTLQKHLEGKEEYVELKEGTSV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggatatctatgacccccagacccttgggataatggtatttggtggattcatggtgatc
tctgctctcgggattgctcttgtctccaccttctccatgaaggagacctcttatgaggaa
gccctggctaaacaacgcagagagctgggtaagatacagaccactcgctctgacaaaaag
aagaaggacaaagtatctgagaagaagggccgtggaaagaaaagagaggaaaagcccaat
ggacaaatcccagagtctgaagaaattcaagaggaagttgaagctgagacagtcattgag
tctgctgctgccccagctgtagctgctgctcctgcccctgaacctgtcgctgatttagat
gttaagccaactgcagcaccagctggcgccgagctaaagaatgccgctcaaccaagccct
gctctctctgagccctcacctgcaccctcaccaaaagagaaaaagaagaagaaggtggct
aaagtcgagccggcctctttccaaacagccccacttgtggctgccactgcacctgtcaag
tcctccacagtacctgcttcaacccaggcccccatgtctgccccgactaaagcaaccgct
ccatcctctgagtctgcccctgcgccagccaagtctgcccctgcgccagccaagtctgcc
cctgcgccagccaagtctgcccctgcaccagccaagtctgcccctgcgccagccaagtct
gcccctgcgccaaccaagtctgccccagcgccagccaagtctgcccctgcaccaaccaag
tctgccccagctccagccaagtctgcccctgctccagccaagtctgccccagctccagcc
aagtctgccccagctccagccaagtctgccccagcgccagccaagtctgcccctgcgcca
gccaagtctgcccctgcgccagccaagtctgctgcagccccagccaagtcttcacctgct
ttatctaagagtgccccagtgctggaagctgtcactaaagatgtccctgtgatggcagtg
cccccagttggctctcagcagacccctgctgttgcaggaaaagtacaggagcccaagaag
aaggcctctaagaaaaagactgagcctgtggcagcagtggattctgctgatgctcctctg
tacctgccctacaaggctctggtgtcgaccatcagtagcatggtgttcagtgaggtcgag
gctcataggctcatcgagatcctgtctgagaaagttggcatcatccaggacacctggcac
aaggccactcagaaaggagacccagtggccatgctgaagaaacaactggaggagagggag
aagcagctggcggcagagcaagaggatgcttctgcggcaaagaatcgcctcagggaactc
accaaggagctgtctgctgagaagtcgaaggtggccagtgtggagacaaggctgagttcc
cagttgagtaagagggagcaagaaatgattgctctgcaagcacgcatgcaggctagttac
caggaccatgtggcacagacccagggcttcaatgctaagattgtcagcctgcaggaccag
ttggaaaaaggccccaatgcccagctggcccgtctacagcaggagaactccattcttcgc
gacgccctcaaccaagccactagtcaggctgagagcaagcaaaatgctgagctggccaag
ctacgtcaggaatgcacaaagttaaccaaggaacttggagagaagacagagggtctgctt
gctgatgagcacatcaggaaagggctagaagccaagctgtcggctacagagaagcagctc
tccctgctgcaggccagtcatggggagagtgagcaggcgttgcagaggagaatggaggag
gtgtgcgaggagctcagggcaacacagagtcaaaacggcagtctgcaggccactttggac
aatacccagcaggacagcagcgcactctcagagtatcaagtgcgtattgggagattggag
gctgatatcagtgagcgctctgctcaggtggatgccctcactgcacagctagaggagata
cagacagagaaaagccagcttgtacagcaggtggcctccatcaactccctgctagaagcc
aatcagaccaaaaaggaggatcataacgaccaggtgcatgctgcagaagtggaagagcta
aagctcagtcttcaagagagaaccaaccagttgaacacatttcaagaggaactgaagcaa
ctgcagttgaagcaggaagctgctgacaacactattgtggagctagaggaaagaaataaa
agtgaggatgtcactcttatcacatcgcttcaggatgaacttaaaaacctcaaggaagag
tttgagcaacttaacaacacaccacagtcagacacctccacagagctgggactgctacag
agaagcctgactgagaaggatgtccttgtcacatcactacaagaggagctgagagaagtg
ggagaaaagatggccaccgatgcacagagtgttacggcagaactgacagcttttcaaagt
gaaaccaaagaaactctccagacactattcccacagatacccgtagagatggagcagtcc
aactggttacaagtatttacgcagaaggctcaggaaaatctcagccagcagagccaggag
tctgggtcaagtacagtgttgcctgagttgcttgggaaattgaaggaggctgaggagagc
catggctcactgcaggctgaatgtgaacagtaccggatagtcctggctgaaacggaagga
atgctaaaacatctgcagaagagtgtggaggaagaagaggtggtatggaagtccaagatg
actaactctgaggaacagctgagtgtggctttggagaaggtcagcaagctggaggcagaa
aaccaaagtgtagaaaagttgaaggagcagatgatgcttctggaagcccagctggagaag
cagtcagaccaccaggagacctcagaggagatggagcaggaacatgcgcaggtgaagctg
cagcttttggagtgtcagagccagctggatttggcccaaaaggaggcccaggcacacaag
gaggagctttcacaggtcagagagcagctgggcgagatcacgatgcaggctcagcgagaa
cagaatggcccagctgaggctcaacccagtcagttccagaacgagctgagtcagacaact
gagaagctgcacggggaggtagctcagagacagcagctttcagaagagtttgagcaggcc
cagaagacaataacagaacttcaggctcagttggatcttctaaacgtttctgcggggtca
ccacaagctgacacagaagatgttccacagctccaggagcgcctggagaaggagaagaag
ctgtccaaagatctgggccaggcggccaccaagctgcagcagctactcaaagccacccag
gaacagctgaccaaagagagagacacagtgagaacacttcagaagcacctggaaggaaag
gaggaatacgtagagctgaaggaaggaacatccgtctga
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