Cyclopterus lumpus (lumpfish): 117743984
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Entry
117743984 CDS
T09199
Symbol
ppifa
Name
(RefSeq) peptidylprolyl isomerase Fa isoform X1
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117743984 (ppifa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
clum03110
]
117743984 (ppifa)
Enzymes [BR:
clum01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117743984 (ppifa)
Chaperones and folding catalysts [BR:
clum03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117743984 (ppifa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
117743984
NCBI-ProteinID:
XP_034407909
Ensembl:
ENSCLMG00005016847
LinkDB
All DBs
Position
15:complement(11005319..11007792)
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AA seq
224 aa
AA seq
DB search
MLRIRYRVRYSTPGVVAARLFSSGPAKNPVVFLDIEADSEPLGRITIELNADVVPKTAAN
FRALCTGEPGFGFKGSVFHRVIPEFMCQVRVTVKMEAHWMCSPCCLLLCFLFQGGDFTNH
NGTGGKSIYGKTFKDENFILKHTGPGTLSMANSGPNTNGSQFFICTNKTEWLDGKHVVFG
QVKDGMDVVTKMESFGLHDGGVIKTILITDSGEIPQDHTRTSVG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgctacgaatacggtaccgcgtgagatacagcacgccgggcgtcgtcgctgcgaggctg
ttttcttccggtccggccaagaaccccgtcgtgtttttggacatcgaggccgacagtgag
cctctcggaaggataaccatcgagttgaatgcagatgtcgtgccaaagactgcagcaaac
ttccgcgcactgtgcacgggggaacctggcttcggattcaagggatctgttttccacagg
gtcatacctgagtttatgtgtcaggtaagagttacagtaaagatggaggcgcactggatg
tgttcgccatgttgtctgttgctgtgttttctgtttcaggggggagatttcaccaaccac
aacggcacaggagggaaatctatatacgggaagacattcaaagatgaaaacttcatatta
aaacacactggtccaggaacactttcgatggcaaattcagggccaaacaccaacggctcc
cagttcttcatctgtacgaataaaactgaatggcttgatggtaaacacgtggtgttcggg
caggtgaaggacggtatggacgtggtcaccaagatggaatcgtttggtttacatgacggc
ggtgtgattaaaacaattctcatcactgacagtggggagatcccccaagatcacacaagg
acttctgtcggatga
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