KEGG   Cyclopterus lumpus (lumpfish): 117743986
Entry
117743986         CDS       T09199                                 
Name
(RefSeq) B-cadherin-like isoform X1
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04371  Apelin signaling pathway
clum04514  Cell adhesion molecule (CAM) interaction
clum04517  IgSF CAM signaling
clum04518  Integrin signaling
clum04520  Adherens junction
clum05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    117743986
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    117743986
   04517 IgSF CAM signaling
    117743986
   04518 Integrin signaling
    117743986
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    117743986
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    117743986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clum03036]
    117743986
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117743986
   04090 CD molecules [BR:clum04090]
    117743986
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    117743986
Cell adhesion molecules [BR:clum04515]
 Cadherins
  Major cadherins
   117743986
CD molecules [BR:clum04090]
 Proteins
  117743986
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_FAT4_N Cadherin_CELSR2_9th TM_ErbB1 Fibulin_C GldM_2nd
Other DBs
NCBI-GeneID: 117743986
NCBI-ProteinID: XP_034407914
Ensembl: ENSCLMG00005021197
LinkDB
Position
15:complement(22837151..22852314)
AA seq 967 aa
MGAARVAVWGILIVAFQATTFVTTEKPTCVPGFKSDLLIFKVFKKHLRPGMRLGNVGFSD
CTDRTRFLFSSDNSHFTVQADGVLKVKRPTVIHGQRDFVIHYWDSQRRSMSVPVQVVHHR
NHHHDSKNHHGEHHHHGEHHHHGEHHHHGEHHPHGHPHGHPHNHSHNDPHGHSHNHSHNH
SHNHSHNHSHNHPHNHPHNHQHHQHNHTEVESANNTENATDGQVPILHFPKTVDGLRRRK
RDWVIPDLKVSENDRGPYPLKVSQIRSNEDKIKKIYYKITGPGASEDPVGLFTMDRDTGN
LYLIQPLDREAKAMYMFQAHATSDGGGISEDPMDIVVNVIDQNDNRPIFDQDTFLGEVAE
ASPKGFEVIKVVATDLDEPNNDNSDIRYSILSQDPALPSDKLFDINPVTGAIRVEAGGLD
REKYPKYTLVVQAADMVGRGSTVEAKVILTVTDSNDNAPAFTQSSYEASVDENKVDAHIL
MMTVTDGDEPLSPAWNAIFTIVSGDPGGHFSVRTGTNKHEGILSTVKGLDFERSTMHTLL
VAVKNEVPFATPLATSTATVVVRVLDVNEAPIFDPMEKVVSKREDLALDSEVVQYTAFDP
DTARKQKVMYRVMRDPAGWLNVAKDTGLITVKNEMDRESVFVKDNKYTALIGAYDNDDVP
ATGTGTLIIQLEDVNDNAPTIEERTIKVCHKESVPQLLSVTDKDGPGFTAPYSVSLQGMS
KTNWTARMNGSKTGILLNLGVELESGEYLVVLRVADNQGLEQDSTVQATVCDCTGEEVIC
KGRVAGGTGLPVILGILGGILLLLMLVLLLLIFARRRRGEQKVPLLQDDDIRDNIYYYDE
EGGGEDDQDYDLGVLHRGLDNRPEVFRNDVVPNFMPAPQYRPRPANPEEIGNFIDDNLKA
ADNDPTAPPYDSLLVFDYEGGGSDGGSLSSLNSSSSGDQDYNCLNDWGPRFKKLADMYGG
GEDDDML
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgggggccgcccgggtcgcggtttggggcattttaatcgtcgcttttcaggccacaact
ttcgtgactactgagaagccaacatgtgtccctggattcaagtcggatttgttgattttc
aaggtgttcaagaagcacctgaggccgggcatgagactgggaaacgtgggcttctctgac
tgcacagaccgcacacgatttctcttcagcagcgataacagccacttcacagtacaggca
gatggtgtactgaaggtaaaaagaccaactgtgattcatgggcagcgtgattttgttatc
cactactgggactcacaaaggcgctcaatgagtgttcctgtccaagtagtacaccatagg
aaccaccaccacgattctaagaatcaccatggagaacaccatcaccatggagaacaccat
caccatggagaacaccatcaccatggagaacaccatccccacggacatccccacggacat
ccccacaaccattcccacaacgatccccacggacattcccacaaccattcccacaaccat
tcccacaaccattcccacaaccattcccacaaccatccccacaaccatccccacaaccat
cagcaccaccaacacaaccacactgaagtggaatctgctaataacacagagaatgcgact
gatggacaggtgcccattctgcatttccccaagactgttgatgggctgaggaggaggaag
agggactgggttattcctgacttaaaagtgtctgagaatgacagaggaccctaccctcta
aaagtatctcaaatccgttcgaatgaggataaaataaagaagatctattacaagatcact
ggtccaggagccagtgaggaccctgttggcctgttcaccatggacagagacactggtaat
ctgtacctcatacaaccactggacagggaagcaaaggccatgtacatgtttcaagcgcat
gctacgtcggatggtggaggaatatcagaagaccctatggacattgtagtgaacgtaatt
gaccagaatgacaacagaccaatattcgatcaagacaccttcctgggagaagttgctgag
gcctcaccaaaaggtttcgaggtgattaaggtcgtggccacagatctcgacgagccaaat
aatgacaactccgacatccgatacagtattttgagccaggatccagctcttccctccgac
aagctgtttgacatcaaccccgtcactggagccatcagggtggaggccggcgggctggac
agagagaaatacccaaagtacactctggtggtccaagcagctgacatggtgggacgcggg
tcgactgtggaagccaaagtaatcctcaccgtcaccgatagcaacgacaatgctccggcc
ttcacgcagtcttcctacgaggcgtcggttgacgaaaataaagtggacgctcacatcctc
atgatgacggtcacggatggcgacgagccgctttccccagcttggaacgccattttcacg
attgtcagcggtgaccccggagggcatttctctgtgaggactggaaccaacaaacatgaa
ggaatcctgtctaccgtcaagggtcttgactttgagaggagcaccatgcacactctgctg
gtggccgtgaagaacgaggttccctttgccacgcccctggccactagcaccgccaccgtg
gtggtgcgcgtgctggacgtcaacgaggctccgatctttgatccgatggagaaggtggtg
tcaaaacgggaggacctggccttggacagtgaagtggtgcagtacaccgccttcgaccca
gacaccgcacgcaaacagaaagtcatgtatcgagtaatgcgagaccctgccgggtggctg
aatgtggccaaagacacaggcctgattacagtaaagaacgaaatggacagagagtccgtc
tttgtcaaggacaacaaatacacggcactcattggtgcctatgacaacgatgatgtccca
gccacaggaaccggcactctaataatccagctcgaagatgtcaatgacaatgcgcccacc
attgaggaacgcacaatcaaggtgtgtcacaaggagtcggttcctcagctgctgtcggta
acggataaagatggaccgggcttcactgctccatacagtgtctcattacagggcatgtcg
aagaccaactggaccgctaggatgaacggttccaaaacgggcatcctcctgaatttaggc
gtggagctggagagtggagagtacttggtggtcctgagggtggcagacaaccagggcttg
gagcaggacagcaccgtccaggccacagtctgcgactgcaccggggaagaagtgatctgc
aaaggccgggtggcaggtggcaccgggctccctgtaatcctgggaatactgggaggcatc
ctgttgctgctcatgctggtgttgctgctgctgattttcgcgaggcggaggagaggagag
cagaaggtacctctactgcaagacgatgacatcagagacaacatctactactacgacgaa
gagggcggcggggaggacgaccaggactatgatctgggggttctccaccgcggtctggac
aaccggcccgaagtgttcagaaacgacgtggtgccgaacttcatgccggcccctcagtac
cggcctcgccccgccaacccggaggaaatcggcaacttcatcgacgataacctgaaggcg
gccgacaacgacccgacggctcccccctacgactccctgctggtgttcgactacgagggc
ggcggctccgacggcgggagcctctcctctctgaactcgtcgagcagcggagaccaagac
tacaactgcctcaacgactggggaccccgcttcaagaagctggccgacatgtacggaggc
ggagaggacgacgacatgctgtaa

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