Cyclopterus lumpus (lumpfish): 117744062
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Entry
117744062 CDS
T09199
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117744062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117744062
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117744062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
117744062
NCBI-ProteinID:
XP_034408038
Ensembl:
ENSCLMG00005008447
LinkDB
All DBs
Position
15:4955579..4980373
Genome browser
AA seq
488 aa
AA seq
DB search
MSTYTVSLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLVQGDVIVAIDGVGTDG
MTHLEAQNKIKMANYNLTLTMTKAKRPAPMQSQRMDTSIPMIPHQQFEIETSLGVTLQYQ
QQIPQQYQQPIPQQYQQPIPQQYQQPIPQQYQQPIPQQYQQPPTQQAPPTQQSSIQIPLG
SAPLKVVSTACIYPSQPASAPPPAPAPLQPRPPAAASAPAPGGPASSNRPPWVSDTNFAD
KFDPSKMTTTTMKMLPQAAPPPPAYIPNPSPSAPVAPSPAPIISSPAPFAPVARGVAQRA
ERVAASNRSALCGSCNSVIRGPFLVALGRSWHPEEFNCHYCHVSLADVSFVEEQNNVYCE
NCYEEFFAPTCARCTTKIMGEVMHALRQTWHTTCFVCAACGNAFGNSLFHMEDGEPYCEK
DYISLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCK
KHAHAINV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctacaccgtgtcgctgcccggccccgggccctggggcttcaggctgcagggg
gggaaggacttcaacatgcctctgaccatctccaggatcactccgggcagcaaggcggcg
cagggtaacctggtccagggtgacgtcatcgtcgccatcgacggcgtcggcaccgacggg
atgactcacctggaggcccagaacaagatcaagatggctaactacaacctgacgctcacc
atgaccaaggccaagcgtcccgctccgatgcagtcacagagaatggacacctccatcccc
atgatcccacaccaacagtttgaaatagaaacgagtctgggcgtgaccctgcagtaccag
cagcaaatcccacagcagtaccagcagccaatcccacagcagtaccagcagccaatcccg
cagcagtaccagcagccaatcccacagcagtaccagcagccaattccacagcagtaccag
cagccccccacgcaacaggccccgcccactcagcagagctccattcagatccctcttggc
tctgcccctctcaaggtggtcagcaccgcctgcatctacccatcgcagccagcttcagct
ccacctcctgctcctgctccacttcagccccgccccccagctgccgcctcagccccggct
ccaggtggccccgcctcctctaaccgacccccctgggtatccgacaccaacttcgccgac
aagtttgaccccagtaagatgacaaccaccaccatgaagatgctgccccaggccgcccct
cctcctccagcatacatccccaacccctctccctccgcacctgtagctccaagccccgcc
cccattatatcaagccctgccccatttgcgcctgtggcaaggggtgtggcccaaagggcg
gagagggttgccgccagcaaccgctcggctctgtgtgggtcctgtaacagcgtcatcagg
ggccccttcctggtggccctcggccggtcctggcaccccgaggagtttaactgtcactat
tgccacgtgtcactggctgacgtcagcttcgtggaggagcagaacaacgtctactgcgag
aactgctacgaggagttcttcgctccgacctgtgcccgctgcacaaccaagatcatgggg
gaagtgatgcacgccctgcggcagacgtggcacaccacctgctttgtgtgcgcggcctgc
ggcaacgcctttggaaacagcctcttccacatggaggacggagagccgtactgcgagaaa
gattacatctcactcttcagcactaagtgtcatggctgtgacttccccgtcgaagcgggc
gataagttcattgaggctctgggccacacctggcacgacacctgcttcgtctgtgcggtt
tgccacgtgaacctcgagggtcagcctttctactcaaagaaagacaaacctctgtgcaag
aagcatgctcacgccatcaatgtgtag
DBGET
integrated database retrieval system
