Cyclopterus lumpus (lumpfish): 117744067
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Entry
117744067 CDS
T09199
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
KO
K10980
non-homologous end-joining factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117744067 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clum03400
]
117744067 (nhej1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117744067 (nhej1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
UMPH-1
Motif
Other DBs
NCBI-GeneID:
117744067
NCBI-ProteinID:
XP_034408054
Ensembl:
ENSCLMG00005010344
UniProt:
A0A8C2XLW4
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All DBs
Position
2:complement(1645464..1653186)
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AA seq
314 aa
AA seq
DB search
MEARGAPADVLLQLPWLPVSIGGCQLLAKSWFGETAYHLLLTDVNCVWEERMDSVAIQRR
AQELNRRLRAKVEAFFSHLREVAQPCLTGSGGQADGGEAQVSLTRQEDGNIGIKLKSELV
GLPFYWEFHCTPAPVTVVCAQLVRPLLAMSHLLQQQVEQQGGLLGRKDAEIQDYRENGAV
LSRERLQTDVFEEKTYREDFMSKALPLIPSGRTDAPAFDADLQRLYAAIVAHGNARKRKL
SPGRRAAEEEEGEPDVPSSLGGSDIDTGAGEGRPEDAAGAKMADRPAEQQSLPAPRPAER
PSSKPKKKKVGLFR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagaggagcccccgctgacgtgctcctgcagctcccctggctccccgtgagc
atcggcggctgtcagctcctcgccaagagctggttcggggaaacggcgtaccacctcctg
ctgactgacgtgaactgtgtgtgggaggagaggatggactccgtcgccatccagaggcga
gcgcaggagctcaacagacgtctgcgagccaaggtcgaagctttcttctctcacctgcgc
gaggtggctcagccatgcctgacgggaagcggcgggcaggccgacggcggcgaggcacag
gtctccctgacgcgccaggaggacggaaacatcggcatcaagctgaagagcgagctggtg
gggctgcccttctactgggagttccactgcacccccgcccccgtcaccgtggtgtgtgca
cagctggtgcgccccctgctggccatgagccacctgctgcagcagcaggtggagcagcag
ggaggtcttctggggaggaaggacgctgagatccaggactacagagagaacggagcggtg
ctcagcagagagcggctgcagacggacgtctttgaggagaaaacgtacagagaagacttc
atgtcaaaggctcttcctctgatcccttctggccggaccgacgctccggccttcgacgcc
gacctccaacgtctgtacgcggccatcgtcgcccacggcaacgcccggaaacgcaaactg
tccccggggcggcgggcggcagaagaagaagaaggagaaccggacgtcccgtcgtcttta
ggtggatccgacatcgacaccggagcaggtgagggcaggccggaggacgccgccggagcc
aagatggccgacagacctgcggaacaacagtcgctgccggcgcccagacctgcagagcga
ccgtcctccaaaccaaagaagaagaaagtgggactgttccgatga
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integrated database retrieval system
