KEGG   Cyclopterus lumpus (lumpfish): 117744140
Entry
117744140         CDS       T09199                                 
Name
(RefSeq) protein bicaudal C homolog 1-like
  KO
K18756  protein bicaudal C
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117744140
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117744140
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 KH_Vigilin SAM_2 KH-I_KHDC4-BBP KH_GLD-3_3rd KH_2 KH_Mug60-KHD4 SAM_Ribosomal_mS41
Other DBs
NCBI-GeneID: 117744140
NCBI-ProteinID: XP_034408157
LinkDB
Position
15:8492066..8542155
AA seq 969 aa
MAAQCDALSGYLQQSDQGSNSERSADSPLPGSEEDLSGLCPLPDPEWTEERFRVDRKKLE
VMLLAASEGRVNGGEDFFQKIMDETQTQIAWPSKLKIGAKSKKDPHIKVCGKRENVREAK
DRIMSVLDTKSNRVTLKMDVSHTEHSHVIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEK
SNQVSIAGQPGGVEAARVKIRELLPLVLSFELPAIMQSDPSSPTVQHISQTYSLTVSFKP
PTRLYRATGVVRGSQNNANAVKRGTALLLEHLSGSLASTISVTTHLDIAPQHHLFMKGRN
GSNIKHITQRTGAQIHFPDPNSPQKKSTVYIQGTIESVCLARQYLMGCLPLVLMFDIKED
IEVEPQCITALMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARKFLLGLESSGVS
SSSPSVLLNPATTVPSPSFICPVGLDILASAGLGLSNLGFLGATATHSLNSAAPNAVLNS
LNSSMNPMQTPSPSTPTPTTSLWPSSLTSTQGLFIGHLLLHPSAQATLSSILLSSVQGYN
QSTPSPPPGLAPIDKQPNGVPDCTKGPCTLNGHVKHPSSVYGRIATASLAETVLSPAPCD
SVQEASGHNPSEPRSSKSSPDDGSDTFVEVGMPRSPSHSANGIELKQMLASCKTSSGKRQ
ALELLQGTKNSHLHSDCLLSDAESSSSDSPVADKRAPGSERAAERERIRLVPQTSFANIQ
AFDYEQKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAETIKELRRANHVSYKPSM
STTFEDSPLSLSRSGSREGLGNGSESDNWRDRNGTGNGLPSHDEFPSVVGSPKRKQNKSA
AEHYLSSSNYMDCISSITGSNGCSLNSSLKGSDLPELFSTLGLGKYTDVFQQQEIDLQTF
LTLTDQDLKELGITTFGARRKMLLAISELNKNRRKLFEPPIRSSFLEGGASGRLSRQFHA
DMASVSGRW
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggctgcccagtgcgacgctttaagcggatacttgcagcagtcggaccagggctccaac
agcgagcgcagcgccgactctcctctcccgggatcagaggaggacctgagcggactctgc
ccgctgcccgacccggagtggaccgaggagaggtttcgggtggaccgtaagaagttggaa
gtcatgctattagctgcctctgaggggagagtcaacggaggggaggatttctttcagaag
atcatggatgagacccaaacgcagatcgcctggccctccaaactgaaaatcggagccaag
tccaaaaaagatccacacatcaaggtgtgcgggaagagggagaatgtgagggaagccaaa
gacagaattatgtccgtccttgacacaaagagtaacagggtaactctgaagatggacgtc
tctcacacagagcactctcacgttattggaaaaggtggcaacaacatcaagaaggtgatg
gaggagacgggttgccacatccatttcccagactccaacaggaacaaccaggcagagaaa
agcaaccaggtgtccatcgcaggccagccaggaggagtggaggcggctcgagtaaaaata
agagagctgcttcctcttgtgctgtctttcgagcttcctgccatcatgcagtctgacccc
agctcccccactgtgcagcacatctcgcagacctacagcctcacagtctccttcaagccc
ccgacccgcctctacagggccaccggcgtggttcgcggctcacagaataacgccaacgcc
gtcaagagaggtacagctctgctgttggagcatttgtctggtagtctggcaagcaccatc
tccgtcaccacccacctggacatcgccccccagcaccacctcttcatgaagggccgcaat
ggcagcaacatcaagcacatcacccagcgaacgggagcccagatccacttccctgaccca
aacagcccccagaagaaatccacagtctacattcagggcaccattgaatcagtctgcctg
gcacggcagtacctcatgggctgcttgcctctggtgttaatgtttgacattaaagaggac
attgaggtggagccccagtgtatcacagcactaatggagcagctggatgtcttcatcagt
atcaaaccaaagccaaaacaacccagcaagtctgtcatagtcaagagtgtggagaggaac
gcagtgaacatgtacgaagcccgaaagttcctcctgggtctggagagcagcggggtgtcg
tcctcctcgccgtctgtgttgttgaatcccgccaccactgtcccgtccccgtccttcatc
tgccccgttggcctggacatcctggcctcagctggcctggggctgagcaatctgggtttc
ctgggagcgacagcgactcactccctcaactctgctgcaccgaacgccgtcctcaacagc
ttaaattcctccatgaaccctatgcagaccccgagccccagcacccccacacccaccaca
tccctctggcccagctcactcaccagcacccaaggtctgtttattggccatctgctgctg
cacccctccgcccaggccacattgagtagcatcctgctgtcgagtgttcagggttacaat
cagagtacgccgtccccacctcctggcctcgctcccatagataagcagcccaacggggtc
ccggactgcaccaagggcccctgcaccctcaacggacacgtcaagcatcctagctccgtc
tacgggaggatagcgactgcatcacttgcagaaaccgttttgagcccagccccatgtgac
tcggtccaggaggccagtggacacaatccttcagaaccgcggtccagcaagtccagccca
gatgacggttcggacacatttgtggaagtgggcatgcccagaagcccctcgcactcagcc
aatggcattgagctgaaacagatgctggcttcatgtaagacgtcatcagggaagcgacag
gctctggagctgctgcagggcaccaagaactcccatctacactccgactgtcttctctcg
gacgcagagtccagctcatcagacagccctgtggccgataaacgggctcctggcagcgag
cgagcggctgagagggagcgaatcagactggtaccacaaacctccttcgccaacatacag
gcatttgactatgaacagaagaagctgttggcaaccaaagctatgttaaagaagcccgtg
gtgactgaggtgcggactcccaccaacacctggagtggtctgggcttctccaagtccatg
ccagccgagaccatcaaggagctgcgaagagccaatcacgtttcgtacaagcccagcatg
agcaccaccttcgaggattctccgctgtccttgtctcgatccggcagcagggaaggcctc
ggcaacggcagtgaatctgacaactggcgagaccggaacggcaccggtaacggcctgccg
agtcacgacgagttcccctccgttgtcggcagcccaaagaggaagcagaacaaatctgct
gcagagcattacctcagcagcagcaactacatggactgcatctcctcgataactggcagc
aacggctgcagcctgaactcgtctctgaaaggctcagacctgcctgagctgttcagcacg
ctgggcttagggaagtacacggacgtcttccagcaacaggagattgacctccagacattc
ctgactttaacagaccaggacctgaaggaactgggcatcaccacctttggagcccgcagg
aaaatgctgctcgccatctcagaactaaacaagaaccggaggaaactattcgagccgccc
atcaggtcctctttcctggaagggggagccagcggccgcctttcccgtcagtttcacgca
gacatggccagcgtcagtgggcgatggtag

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