Cyclopterus lumpus (lumpfish): 117744172 Help Entry 117744172         CDS       T09199                                  Symbol col13a1 Name (RefSeq) collagen alpha-1(XIII) chain   KO K16617   collagen type XIII alpha Organism clum  Cyclopterus lumpus (lumpfish) Brite KEGG Orthology (KO) [BR:clum00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:clum00536]     117744172 (col13a1) Glycosaminoglycan binding proteins [BR:clum00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117744172 (col13a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen DUF3995 Motif Other DBs NCBI-GeneID:  117744172 NCBI-ProteinID:  XP_034408210 LinkDB All DBs Position 15:23656196..23758422 Genome browser AA seq 636 aa AA seqDB search MDEHQQWAVAGKPGEETWQQQPSKQPRWRNWRDLPGALICVAASVLCLGACVVVLVRTSE LQTRIVSLEQRQLSAWTLSLEQVEPVVLGRLDQILEEKLAARLPKTRESREAPHSCLCPP GPPGPPGRAGFPGDKGNMGIPGRMGLKGHAGKKGAPGEPGLSIIGPRGPPGQPGTRGFPG FPGPIGLDGKSGHSGPKGDMGQRGVKGVLGEPGPKGEKGVCGDYTHRKRRIVQPRVGQLA TQGEPGAQGPPGLPGPPGLPGTSGLNGASGPMGKPGEPGKPGKDPRLLPGLKGEPGVPGP KGDQGDVGPLGPEGSKGVKGDQAIKGEKGEPSIAAQRIKGEPGSPGVPGLMGFKGDTGDT GDKGEAGNEGPAGPRGPPGPTGEPGKAEIHNNDNDIRNIPLMGPPGLPGPSGPSGTKGEV GLPGAPGLDGEKGPRGKPGDHGPPGPAGPGGPRGEGGIMGFSGPKGDKGDMGPSGSPGPK GDAGQGGRSEMIYGPPGPPGPSGPVGPAGSQGFSGPKGEPGIGIRGEKGASGQKGDKGDR GHLGLPGLIGPAGVSGPAGPKGERCEKGDAGWPGPIGPQGIPGLVGPQGLKGNRGERGKK GNRGTKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNK NT seq 1911 nt NT seq  +upstreamnt  +downstreamnt atggatgagcatcagcagtgggcagtcgccggtaaaccgggtgaggagacgtggcagcag caaccgtcaaaacagccgcggtggaggaattggagagatttgcccggcgcactgatctgc gtcgcagcatctgttctgtgcctcggggcgtgcgtcgtggtgttggtgcggacctccgag ctgcagacccggatagtaagtctggagcagcggcagctctccgcctggacgttgtctctg gaacaggtggagcccgttgtcctgggccggctggaccagatcctggaggagaagcttgca gcgagactaccgaagacacgggagtcgagggaggctccccacagctgcctgtgtccccca ggacctccaggtcctcctggacgagcaggcttcccgggggacaaaggaaacatggggatt cctgggagaatgggcttaaaaggacacgcagggaaaaagggagcaccaggcgagccaggt ctgtctatcatcggtccaagaggacccccgggacaacccgggacaagaggatttccaggc ttcccaggtccaattgggttggatggcaagtctgggcacagcggaccgaagggagacatg ggccagcgtggcgttaaaggagtcctcggggaacctggacccaaaggggagaagggcgtc tgtggagactacacacaccggaagcggcgcattgtacagccgcgtgtggggcagttggcc acacagggtgagcctggagcgcagggacccccgggacttcccggaccccccggactccca ggaacctcaggtctgaatggagccagtggcccaatgggtaagcccggtgaaccaggcaag ccaggaaaagacccgcggcttttaccaggactaaagggggagccaggtgtgccaggacca aagggggatcaaggggacgttggcccactcggtcctgaaggctcaaagggagtaaaggga gaccaagcaattaagggtgagaagggagaaccgagcattgcagcccagcgaattaaagga gaaccaggttcaccaggagtgccaggcctcatgggattcaagggtgacacaggtgatacg ggagacaagggggaagcaggcaatgaaggcccagctggaccaagaggtcctccgggcccg actggggagccaggcaaggctgaaatccacaacaatgacaatgatattcgcaacataccg ctgatgggcccccctggattacctggaccttcagggccctctggtaccaagggtgaagtt ggtctaccaggtgctccaggactggacggagagaagggacccagggggaagcctggagac cacggccctccaggcccagccggtcctggaggtcccagaggggagggtggtatcatgggc ttctcgggacccaaaggggacaagggagacatgggtccatctggatcacctgggcccaaa ggtgacgctggacaaggaggaaggtcagagatgatttatggacctccagggcccccagga ccttcaggaccagttggcccagcaggatctcaaggattttcagggcctaagggagaacca ggcatcggcatcagaggtgaaaagggagcgtcgggtcagaagggcgacaagggcgacaga ggccatcttggactccctggtctaataggaccagcaggtgtgtctggaccagcaggacca aagggggagagatgtgaaaagggagatgcaggatggccaggaccaatcggacctcaaggc atccctggtttagttggaccacaaggactcaaagggaaccggggagagaggggcaagaaa ggcaacagggggaccaaaggggataagggagaccaaggagcacctggattagatgccccc tgtccgttgggagacgatggcttacctgttccaggctgctggaataaatga

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