Cyclopterus lumpus (lumpfish): 117744219
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Entry
117744219 CDS
T09199
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3 isoform X1
KO
K11491
condensin-2 complex subunit D3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117744219 (ncapd3)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
117744219 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
PDS5
Adaptin_N
Cnd3
HEAT_GCN1_C
Cohesin_HEAT
IL13
Motif
Other DBs
NCBI-GeneID:
117744219
NCBI-ProteinID:
XP_034408284
Ensembl:
ENSCLMG00005005143
LinkDB
All DBs
Position
15:21394550..21416825
Genome browser
AA seq
1421 aa
AA seq
DB search
MSLISALQFLRLNDISEAWVDAVWDLEFTEQTPLDDTIEDELSVSGDKAFRTLYQCLLAH
AANQQDEASQSIWAILGENEVPIKSLVAVLSFFVLAGKAKTANVQQRVSGLHAASLYLLL
LGIPGSIATKVFHEVLLDTCSDLTSHCWPEDAGKKRKKDIMKSCQADVKRSKPQRREPSE
MEVDGAEEEEEEEELNFSAKDLLNIRDAVVLLVQSLLRLLQTFPLKDRPQSAGHCTQIFS
KLLYFEPAIGEMTFAALDITELRSVPEMAFYGLQLLCSPKHGDQKESLRRVFHQLLHVIL
MMKKDNRGKPSLLVPSQAILSTRNQALRFVCHLVEELKEMALPVLHILLQHICFQMVEKS
EFRSHGAQAVGMLTSQMESTDYARFIKWLFNFSRSSKMVCRLFSVDVVMVLLEQSERSLE
ECPDPEFSCFLPHKFLIQNLLFDRRMDDSPTVQGHALACLAQCLELPSLNATRAVHSLFS
ATGAQTVLEGEITEGSLCSQQTQKTYRTLPFRTVEISTADSADCDAKENLALLLRRVKDS
KINVRKSALQTLVGLLKHNVIPLSWENLATLSERCRDPAVSVKKKALQCVGELLGAKPEC
SVVQKAWLQGVVPAVVDPENSVQDKALEALDQVLLSQVKPYYAGRHLDASQRLTWDLLGL
LCNECLNLSRYFSRAFTIWSKQNKFTQTLIANLMSHTEADHAAGAWLLLSKVVPSSPRLP
YGKILDAWDSMFSSKDVTGTTCCHILCVMGDIAVHLNEETKDRIVADLMSWLKTFTLSLE
VICAAVETLYQLGRSEDIKQTQAFLNQRCGELVSVCEAYLAGIILREKGAQNLNEELMVK
HLHTLGVASLHCPAKVGKRTVLLVESVLTTYSDKLAGCQEELPASLPLSQFKANSLPTRV
RAHGVITLGKLCLQHEELVQKYLPVFARELELGTEVAVRNNVVVIMCDLCVRYTNMVEHY
IPNISACLRDSEAVIREQTLIMLTNLLQEEFVKWKGPLFFRFMVALVDPVPAIASLCEYC
LLHLLLKKNPEMFSQHFIECIFHFSSYNKHKSYNKFTESEREKVRFSLKGAQQREKRFRI
YRFLLEHFTDAQRFNITVKINQTILACFADEELPLDADGADILSETFKILSLKEMKLQVI
STPAGGAAGEEAEEENMATMAKAVLLVAQKKVVSQVQKKAFIENTVPLIIGLKSLLEQKR
SPVLRDLMAYLQVTMQDYRDEVKEFFSGDEQLAAELEFALKTAEKEREMAEQMDSCSLTA
DTRTPTAQASVSEFPTVSEGVLVVLLSPQCSTQGSPVRCRTLPVVFATPQPPRPKPLSTR
LAYSDRRVHSSRLLEHVQTKSIALERTVMQKGAVDDRAISTPKGVGINLTFDEGVSAIFS
DREPSVVGETSVLHVQSNEQQAPGLRQWDVQSPLRQRKKTF
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatatccgcgctgcagtttctgaggttgaatgacatttcggaagcctgggtg
gacgcagtgtgggacttggagttcacagagcaaacgccattggatgacaccatagaggac
gaactctcagtcagtggagacaaggcgttcagaactttgtaccagtgtttactggcccat
gctgctaaccaacaagatgaagcttcgcagagcatctgggcgattctgggggagaacgag
gtgccaatcaagtccctggtggccgtgctgtccttctttgtcctggcgggaaaggctaaa
acggccaacgtccagcagagggtgagcggtctgcacgcggcctcactttacctgctgctg
ctgggaatcccagggagcatcgccaccaaggttttccacgaggttttgttggacacttgt
tcagacctgacctctcactgctggcctgaggacgctggaaagaagcgcaagaaggacatc
atgaagagctgccaggccgacgtcaaacgctccaaaccgcagcggagagaaccctcagag
atggaagtggatggggcagaggaagaagaggaggaagaggagcttaatttctctgcaaag
gacttgctgaacatcagagatgctgtggttctcctggttcaaagcctcctcagactcctg
cagacgtttccgctgaaggaccggccgcagagcgccggccactgcacgcagatcttcagc
aagctcctttactttgagccggccatcggagagatgacctttgcggcattggatatcacc
gagttgaggagtgttcccgagatggctttctacggcctgcagctgctctgctcgccaaaa
cacggagaccagaaagaatccctgcgcagagtcttccaccagctcctccacgtgatcctg
atgatgaagaaggacaacagagggaaaccctccctcctcgtgcccagccaggccatcctc
tccacccggaaccaggccctccgctttgtttgtcatcttgtggaggagctgaaagagatg
gcgctgcctgtactgcacatcctcctgcagcatatctgcttccagatggtggagaagagc
gagtttcgaagccacggagcccaggctgtgggtatgttgacgtcccagatggaaagtaca
gactatgcgcgcttcatcaagtggctgtttaacttctccagaagctcaaagatggtgtgc
cggctgttttctgtggacgtggtgatggttttgctcgaacagtccgagaggagtttggag
gagtgtccggacccggagttctcctgcttcctgccgcacaagttcctgatccagaacctg
ctattcgatcggcggatggacgactcgcccacagtccaaggccacgccctggcctgcctc
gcccagtgcctggagctgccctcgctcaacgccacccgggcggtccacagcctcttctct
gccactggagcccagacagtgttggaaggcgaaattacagaaggtagcctttgctcccag
cagactcagaaaacctaccgcactctgccgttcaggactgtggagatcagcaccgcagac
agcgccgactgtgacgcaaaagagaatctggctctcctcctgcggcgggtaaaagactcc
aagataaacgtgaggaaatcggcgctgcagaccctggttggcctcctgaaacataacgtg
atccctctgagctgggagaacctggccacgctgtcagagcgctgcagggacccggccgtg
tccgtgaagaagaaagccctgcagtgcgtgggagagctgctcggcgccaaaccagagtgc
agcgtggtgcagaaggcgtggctgcagggagtggtgccagctgtggtggacccggagaac
tcagtgcaggacaaggccctggaggctctggaccaggtgctgctcagccaggtcaaaccg
tactacgccggccgccacctggatgccagtcagaggctgacctgggacctgctgggcctg
ctctgcaacgagtgcttgaacctcagccggtatttcagcagggccttcaccatctggtcc
aaacagaacaagttcacgcagactctcatcgccaacctgatgtcccacacggaggccgat
cacgccgccggggcctggctgcttctctccaaggtcgtcccctcgtcccccagactgccc
tacgggaagatcctggacgcctgggacagcatgttcagttccaaggacgtcaccgggacg
acctgctgtcacatcctgtgcgtgatgggagacatcgccgtgcatttaaacgaagaaacc
aaggacaggatagttgctgatctgatgtcttggttgaagacttttactttgtctcttgag
gtgatctgtgctgctgtggagactctttatcaactcggtcgcagcgaagacatcaaacag
actcaggcttttctaaaccagcgctgcggtgagctggtgtcggtgtgcgaggcttattta
gccggcatcatcctgagagaaaagggagcccagaacctcaacgaggagctgatggtgaaa
cacctccacactctgggtgtggcgtcactccactgtcccgccaaggtcggcaaacggacg
gtgctgctggtggagtccgtcttgacgacgtattctgacaaactggcggggtgccaagaa
gagctgccggcgtcgctgcccctctcccagttcaaagccaactctctgcctaccagagtc
agagcacacggagtcatcactttaggcaaactgtgtctgcagcacgaggaactcgtccag
aagtacctgccggtgtttgccagggagctggagcttggcacggaggttgccgtgcgcaac
aatgtggttgtgattatgtgtgatctgtgtgttcgatacaccaacatggtggagcactac
atccccaacatctccgcttgtctgcgagacagtgaagctgtcatcagggagcagactctc
atcatgctgaccaacctgctgcaggaggaatttgtgaaatggaagggccccctcttcttt
cgcttcatggtggcgctggttgacccggtccctgccatcgccagtctgtgcgagtactgc
ctgctccacctgctgctgaaaaagaacccagaaatgttcagccagcacttcattgagtgc
atcttccacttcagctcctacaacaaacacaagtcctacaacaagttcactgagagcgag
agagaaaaggttcggttctccctgaaaggagctcagcagcgcgagaagcgttttcggatc
taccgcttcctgttggagcacttcacagacgcccagcgcttcaacatcaccgtcaagatc
aaccagaccatcttagcatgcttcgcggacgaggagctgccgttggatgcggatggcgct
gacattttgtcagagaccttcaaaatcttgagtctgaaggagatgaagctgcaggtcata
tctactccagcaggaggcgccgcaggggaggaagcggaggaggagaacatggccaccatg
gcaaaggctgtcctgctggtcgcgcagaagaaggtggtgtctcaggtccagaagaaggct
ttcatagagaacacggttcctctcattatcggcctgaagagcctgctggagcagaagcgc
tctcccgtcctccgagacctcatggcttaccttcaggtgacgatgcaagactaccgtgac
gaggtgaaggagttcttctctggagacgagcagctggcggcggagctggagtttgctctg
aagacggcggagaaggagcgagagatggcggagcagatggacagctgcagtttgacagcc
gacaccaggactcctaccgcacaggccagtgtctctgagttcccgacggtcagtgaaggt
gtcctggtggttctgctctctcctcagtgttcaacccagggctcccccgtcaggtgcagg
accctcccggtcgtctttgccacgccacaaccgccacgtccaaagcccctgtctaccaga
ctggcctactctgacaggcgtgtgcacagttccaggttgctggaacatgtccagactaag
tcaatcgctctggaaagaacagtgatgcaaaaaggagccgtggatgacagagccatcagc
acaccgaaaggagtcggcatcaacttgacgtttgatgaaggagtcagcgcaatcttcagt
gaccgagaaccaagtgtcgtcggggagaccagtgtccttcatgtgcagtcaaatgagcag
caagctcctggactgaggcagtgggacgtgcagtctcctctccgccagaggaaaaagacc
ttttaa
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