KEGG   Cyclopterus lumpus (lumpfish): 117744260
Entry
117744260         CDS       T09199                                 
Name
(RefSeq) LOW QUALITY PROTEIN: exportin-5
  KO
K14289  exportin-5
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117744260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clum03016]
    117744260
   03036 Chromosome and associated proteins [BR:clum03036]
    117744260
Transfer RNA biogenesis [BR:clum03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117744260
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     117744260
SSDB
Motif
Pfam: Exportin-5 Xpo1 IBN_N
Other DBs
NCBI-GeneID: 117744260
NCBI-ProteinID: XP_034408339
LinkDB
Position
15:14143738..14157843
AA seq 1227 aa
MADQVSIMCEQLVKAVHVMMDAETGQIYRLEALKFCEEFKETSSFCVPCGLRLADKAQPA
VVRHFGLQILEHVIKFRWNTMQQQEKVQLKECAMQLLSTGTLAILEEESHIKDVLSRITV
EMIKREWPQHWPDMLKEMEALTSHGEAQTELVMLILLRLAEDVITFQTLPNQRRRDIQQT
LTLNMESIVSFMMAILHVNVEDYRKLNGSPGHELQARAHCRVAGATLNTLAGYIDWVSLV
HITTGNCHLLEMLCLLLSEPELQLEAAECLLIAISRKGKLEDRKPFMLLFDDVAIHYILS
AAQSADGLAICETSAESKAVEVVDRRYIFLKRLCQVLCALGGQLCSLVGSDVEVKVPANL
SKYTEAFLAFTTHSSQFLKSSTLPTWGALFRHETLSKDAVVVEMAIKYLRASMTNLVKVR
HXCHTGFPSRNDNPSCRYXRADFDSDEDFNSFFNSFRAQQGEVLRIACRIVPLEAFQIAA
EWLQYQIASPIDTGIQRVSVSKTVEGLCSLLSPSVVQWDAMTVFMECVVTQIFKNVEEER
LPIDQSMELLQAVLNYNTKDPLILSCVLTNVSALFPFVXTKPHFLPQILDKLFNAITFEV
GQESTAPRSRAVKNVRRHACSSIIKICRDYPQYILPCFDLFTVTSRSCSQATATLTHMEK
CSLMEALVLISNQFKDFAKQKAFLDELMASVVADWTSDEMRQVLCDPAVFLSFVGADQVV
NEQSRDADKAGHNRGRLGFCLYAMLGVVKRARWPADLEEAKAGGFVMGYTAAGAPIYRNP
YTAQFLVLLPNLLALIRTNNSLFMPENMARLSESFSRAHEVMDSDKNVVLGLSQHILDIH
DSPVTRTNLERMQGFFSTLYDNCFHVLGNAGLALQQEFYTIESLSEEIAGSAFLSLDNVP
DHRLRPMIRVFLRQLVLACPQEYYNSLLCPLLGPLFAYMQQRLNAKWQVINQRSSVNDEE
EEALCQESQVTQEILEEQLVRLLSREVLDLLAVSCISKKLPEPAANKEEIDEDDMMDSVQ
AASPAQPTEELTELGKCLLKHENIYMTLLTLSFTSLSWKDTTNCHRTASMVCWTLLRQVV
GGNLLREAVTWFFTSVLRGLQIHGQHEVCNSTLSQLAMLIYENLRPRYVELRAVMTQIPN
ISVETLDQYDHRLIDPNAQKLGEKKRKDQFKRLIAGTVGKALCQQFRKEVHIRNLPLLFK
QPKPEKDVQSSEALGLEALFSPENKTL
NT seq 3684 nt   +upstreamnt  +downstreamnt
atggctgaccaggtgtccatcatgtgtgagcagctcgtcaaagctgtgcatgtgatgatg
gatgcagaaacgggacagatttaccgactcgaggccctaaagttttgtgaggagtttaaa
gagacgagctccttctgtgtcccatgtggattacgattagccgacaaagcccagccagct
gtagtgagacactttggtttgcaaatcctggagcacgtcatcaagtttcgatggaacacc
atgcaacaacaagagaaagtccagctgaaggagtgtgccatgcagctgttgtcaaccggt
actcttgctatcctggaggaggaaagccacatcaaagatgttctgtcacgaattactgtg
gaaatgataaagagggaatggcctcaacattggccagatatgctgaaagagatggaggct
ctcactagccatggggaggcacagacagagctagtgatgttgatcctgttgaggctggcg
gaggatgtgatcaccttccagacgttgcccaaccagcgacgcagagacatccagcagaca
ctcaccctaaacatggaaagcatcgtcagcttcatgatggccattctgcatgttaatgtc
gaggactaccgtaaactgaatgggtcacccggacatgaactacaggccagagctcactgt
cgagtcgcgggggctacgctgaatacactagcaggctacatagactgggtgtctctggtg
cacatcaccaccggaaactgtcatctactggagatgttgtgcttgctgctgagtgaaccg
gagctgcagctggaagcagccgagtgtctgctcatcgctatcagccggaagggcaagctg
gaggatagaaagccattcatgctgctgtttgatgatgtggccatccactacatcctttct
gctgcccagtcagcagatggactggcaatatgtgagacctccgctgaatcaaaagcagtg
gaggtggtggaccggcgttacatcttcctgaagaggctgtgtcaggtcctatgtgccctg
ggaggccaactctgctcattagtgggttcagatgtagaggtcaaggtacctgcaaatctc
agcaagtacacagaagcgtttttagccttcactacacattccagtcagtttttaaagtcc
tccactctgcccacttggggagctttgttccgacatgagactctgtcgaaggacgcggta
gttgttgagatggccatcaaatacctcagagcgtctatgaccaacctcgtcaaggtgaga
cactgatgtcatactggatttccatctagaaacgataacccaagttgcaggtatntccgt
gctgactttgacagtgatgaggacttcaattcgttctttaattcttttcgagcacagcag
ggagaggtcttgaggattgcatgtcgtattgtccctctggaggcgttccagatagcagca
gaatggctacaatatcagatcgcgagccctattgataccgggatacagcgtgtaagtgtt
tctaagactgttgagggcctgtgctccctcttgtctccatcagtggtccagtgggatgca
atgaccgtcttcatggagtgtgtggtcacacagatttttaaaaatgtggaggaggagagg
ttgcctatagatcagagcatggagctgctgcaggccgtgctgaactacaacaccaaagac
ccgctcatcttgtcctgtgtgctcaccaatgtgtctgccctcttcccatttgttnaaaca
aagccgcacttcctgccacagattctcgacaagctgtttaatgcgataacatttgaggtt
ggtcaggaaagtacggcacctcggagccgagctgtaaagaacgtgaggaggcacgcctgt
tcttcaatcatcaaaatatgccgggattacccacagtacatcctgccttgttttgacttg
tttacagtcacgtcaagaagttgttctcaagcgacggccacgctcactcacatggagaaa
tgttcgctgatggaagccctggtgctcatcagtaaccagttcaaagactttgcaaagcag
aaggcttttctagatgaactgatggcttcagtggttgcagactggacctcggatgagatg
aggcaggtgctgtgtgaccccgctgtgttcctgtcctttgttggtgctgatcaggtggtc
aatgagcaaagtcgagatgcagacaaagcaggccataataggggccggctgggtttctgc
ttgtatgccatgttgggggtggtgaagcgggcccgctggcccgcagatctggaggaagcc
aaggccggtggctttgtgatgggctacaccgctgctggagctcccatctacagaaacccg
tacactgcccagtttctggtcctgctccccaacctgctggctctaatcagaactaacaac
agtctgttcatgccggagaacatggctcgtctgagtgagtctttctccagggcccatgaa
gtgatggattcagacaaaaatgttgttcttggtctctctcagcatatcctggatatccat
gactctcctgtgactagaaccaacctggagcgaatgcagggttttttctccacattgtat
gacaactgctttcatgtcctgggaaatgcaggtctggccttacagcaggaattctacacc
attgagagcttgagtgaagaaatagctggttctgcttttctctccctcgacaatgtgcct
gaccacagacttcgtcctatgattcgggtgttcctgaggcagttggtgctagcatgtcct
caggagtactacaacagtctcctctgccccctgctgggacctctgttcgcctacatgcag
cagagactcaacgccaagtggcaggtcatcaaccagaggagctctgtcaacgatgaggag
gaggaggcgctgtgtcaggagagccaggtgacgcaagagatcttggaggagcagctggta
cgcctgctcagcagggaggtcctggatcttctcgctgtaagctgtatttcaaaaaaactg
cctgaaccagcagcaaataaggaggaaatagatgaggacgacatgatggattcagtgcag
gcggcgtctcctgcccagcccacagaggagctgactgagctgggaaaatgcctgttaaag
cacgagaacatctacatgaccctgttgaccctctccttcacctctctgtcatggaaggac
accactaactgtcaccgcactgcttcaatggtctgctggacgcttctgcggcaggtcgtt
gggggtaatcttcttcgtgaggcggtcacatggttctttaccagtgtccttagaggcctt
cagattcatgggcagcatgaggtctgcaactctaccctctctcagctggcaatgctcatc
tatgaaaacctgcggcctcgatacgtagagctgagagcggtgatgacccagattccaaac
atcagtgtggagacgctggaccagtacgatcacaggctcatagaccccaatgcccagaag
cttggagaaaagaagaggaaagaccagttcaagagactcattgcaggaacagttgggaaa
gctctgtgtcagcagttcaggaaggaggttcatattcgaaatcttccattgctctttaaa
cagcccaagccagaaaaagatgtacagagcagtgaagcattgggcctggaagctctcttc
tccccggagaataagaccctgtag

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