Cyclopterus lumpus (lumpfish): 117744272
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Entry
117744272 CDS
T09199
Symbol
cdh11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117744272 (cdh11)
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Major cadherins
117744272 (cdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Cadherin_pro
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
117744272
NCBI-ProteinID:
XP_034408354
Ensembl:
ENSCLMG00005005766
LinkDB
All DBs
Position
15:3674350..3694726
Genome browser
AA seq
751 aa
AA seq
DB search
MSMCVSHTSCISPSSPSSSSSFPLLQLHSDVDSGVGNIKYILSGEGAGTIFVIDDKTGNI
HATKTLDREEQAQYTLTAQAVNRDTNKPLEPPSEFIVKVQDINDNPPEFLHGPYYARVPE
MSNVGTSVMQVTASDADDPTYGNSARLVYSILQGQPYFSVESQTGIIRTALPNMDREARQ
EYDVLIQAKDMGGHMGGLSGTTQVKITLTDVNDNPPKFPQSVYSMSVSEDKVPGEEVGRL
KAKDPDLGDNGMVNYRLVDGDGLGLFELSTDSETREAVIKLKKHVDFETKRSYTLRVEGS
NPYIDPQYIAWGPYKDEATIKISVEDADEPPAFVAPSYTFEVAENAPEGAQVGRVHAKDT
DVANNPVRYMIPLYTDIEQFFSVNPDDGMITTTRPLDREAQAWHNISVSATEIGGHHQDT
KVRVNIKVKDVNDNSPEFATNNEVLMCETVALGKVIETVSAVDKDEMAHRQHFTFSLAPE
VTHNHNFSLKDNRDSTASIYVLRKGFSRLTQDVYYLPIEINDNGFPALSSTNTLTIRVCS
CDSRDTILSCNVEPYVLPAGLSPGALIAILACIVILLGIVVLFVALRRQKKEPLIVFEEE
DIRENIITYDDEGGGEEDTEAFDIATLQNPDGANGFLPRKDIKPELQFPIRPGGAGHNGA
NSVDVDDFIKTRIAEADGDPTAPPYDSIQIYGYEGRGSLAGSLSSLESVTTESDLDYDYL
QSWGPRFKKLADLYGTKDCFMDDDGDDGEDS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtgtgtctcacacacttcttgtatctcaccctcttctccctcctcctcctcc
tcctttcccctactccagctccactcggacgtcgactcgggcgtcggcaacatcaagtac
atcctgtccggcgaaggcgccggaacgatcttcgtcatcgacgacaagacgggcaacatc
cacgccaccaagaccctggaccgcgaggagcaggcccagtacacgctgacggcccaggcc
gtgaaccgggacaccaataagcccctggagcctccgtcggagttcatcgtgaaggtccag
gacatcaacgacaaccctcccgagttcctccacgggccgtactacgccagggtgcccgag
atgtccaatgtcggtacgtcggtgatgcaggtgacggcgtcggatgctgacgaccccacc
tacggcaacagcgccaggctggtgtacagcatcctgcaaggacagccgtacttctccgtg
gagtctcagacgggcataattcggaccgccttgcccaacatggaccgcgaggcccgccag
gagtacgacgtcctcatccaggccaaagacatgggcggtcacatgggggggctgtcgggg
accacccaggtgaaaatcaccctcacggacgtcaacgacaacccgccgaagttcccacag
agtgtgtattccatgtccgtgtccgaggacaaagtgcccggcgaggaggtgggccgcctc
aaggccaaggaccccgacctgggagacaacggcatggtgaactaccgcctggtggacgga
gacgggctgggcctgttcgagctgagcaccgactcggagaccagggaggccgtcatcaaa
ctgaagaagcatgtggactttgagactaaaaggtcgtacacgttgagggtggagggatcc
aacccttacatcgacccccagtacatcgcttgggggccttataaggacgaagccacgata
aagatatcggtggaggatgcagacgaacctcctgcgttcgtggctcccagttacactttt
gaggtggcggagaacgcgcccgagggcgcccaggtgggacgggtccacgccaaggacacc
gatgtggccaacaaccccgtcaggtacatgatccccttgtacacggacatcgagcagttc
ttcagcgtcaaccccgacgacggcatgatcaccacgacgaggccgctggaccgagaagcc
caggcctggcacaacatctccgtgtcggccacggagataggaggtcaccaccaagacacc
aaagtgcgcgtcaacatcaaagtgaaagacgtgaatgacaactccccagagttcgccacc
aacaacgaggtcctcatgtgtgaaaccgtcgcactggggaaggttattgagacggtgagc
gcggtggacaaggacgagatggctcaccggcagcacttcacgttcagcctcgcccccgaa
gtcacccacaaccacaacttctccctcaaagacaacagagacagcacggccagcatctac
gtgctgcgtaagggcttcagccgcctgacccaggacgtgtactaccttcccatcgagata
aacgacaacggcttcccggcgctgagcagcaccaacacgctgaccatccgagtgtgctcc
tgcgacagcagagacaccatcctctcctgcaacgtggagccctacgtcctgcccgcgggc
ctcagccccggggcgctgatagccatcctggcctgcatcgtcatcctgctggggatcgtg
gtgttgttcgttgctctgaggcgtcagaagaaggagcccctgatcgtgttcgaggaggag
gacatcagggagaacatcatcacgtacgacgacgagggcggcggcgaggaggacacggag
gccttcgacatcgccacacttcagaacccggacggcgccaacggcttcctgccgagaaag
gacatcaagccagagctccagtttcccatcaggcccggcggcgccggccacaacggcgcc
aacagcgtcgacgtcgacgacttcatcaagacccggatcgcggaggccgacggcgacccg
acggcgcccccgtacgactccattcagatctacggctacgagggccggggatcgttggcc
gggtcgctgagctccctcgagtccgtcaccacggagtccgacctggattatgactatctg
cagagctgggggcccaggtttaagaagctggcggatttgtacgggaccaaagactgcttc
atggacgatgatggcgatgacggcgaagactcttaa
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