Cyclopterus lumpus (lumpfish): 117744285
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Entry
117744285 CDS
T09199
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117744285
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
117744285
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
117744285
NCBI-ProteinID:
XP_034408370
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Position
15:6006324..6012045
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AA seq
553 aa
AA seq
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MSANVPGVIAMLLFYLLVLGVGIWASIKSKKEENKSAADKIEMALLGNRSITKLVGIFTM
TATWVGGCLMMGLTEMIYTPSMGLVSAVLLLAALSFSFILGGLVFIKPMRDHKYVTMLDP
FQIKYGKAYTAVQSLGALLSDILWLAGTLISLGATMNVILDLPYSVSIWISTAVVIVYTL
LGGFYSVAYTDIIQVILIFITMCVCVPFILMSPTSVDITQTALNNTFQAPWIGKLERKFA
WTTIDTFLYLAMGGLGCQAFHQRTLSATSTSAARVTCFVAAFTILLFGIPPILIGAVAVS
TDWNLTSYGSPSPLERGNGAMILPIALNHLTPTFVSITGTGAISAAVMSSADSALISIAS
IFTCNIYKSILRPQASQREIQWVIRATVVVAGLIGTSLTNIKNSIILLVFLCYEVSYILI
FSQLVCALFFKMSNFYGAAAGWLIGLVLRLLSGEPALGLAPVIHFPGCTLEDGSYVQYYP
VKTICMLSAMAANPLFSYLAAVLFNKGLLPEKWDVFKLKAQDSADAKRCDEKEALDETES
PRDILEPMITTTC
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaacgttcccggagtgatagcaatgctgctcttctacctgctggtgctcgga
gtcggcatctgggcctccatcaagtccaagaaggaggagaacaaaagtgctgccgacaaa
attgagatggcgctgctgggaaaccgaagcataacaaagctggtggggatcttcacaatg
acagccacgtgggttggaggctgcttgatgatgggcttaactgagatgatatacaccccc
tctatgggactagtgtcagcggtactcctcttagcagctttatctttttcgtttattttg
ggtggccttgtgttcatcaagccaatgagagaccacaaatatgtgaccatgttggaccct
ttccagatcaagtatggaaaagcatacacagccgttcagtcactgggcgcacttctaagc
gatattttgtggctggctggaacactaatcagcttaggtgccaccatgaatgtgattttg
gatttgccttactctgtgagcatctggatctccactgccgtggtgattgtgtacacactg
ctgggcggtttctactctgtggcgtacacagacatcatacaggtcatcctcattttcatc
accatgtgtgtctgcgtaccgtttatcctgatgagccccacctctgtggacattactcag
acggccctgaacaacacttttcaggcgccctggattggtaaactggagagaaagtttgct
tggacaacgatcgataccttcttatatctggcaatgggaggcctgggatgccaagctttc
caccagaggaccttgtcggctacttccacatcggcagctagggtcacatgcttcgtggcg
gctttcactatcttgctatttggaatccctcctatactgatcggggcagtggctgtatcc
acagactggaacctcacgtcttatggttctccgtctccgttggaacgtgggaatggagct
atgatcctgccgatcgccctcaaccacctcaccccgaccttcgtctccatcactggcacc
ggagctatttctgctgccgtcatgtcctcggccgactctgctctgatctccatcgcctcc
attttcacttgtaacatctacaagtcgatcctgaggcctcaggcatcacagagagagatc
cagtgggtgatccgtgcgactgtggtcgtggcgggcttgatcggtacatcactcaccaac
atcaaaaacagtatcattctgttggtgttcctttgttacgaagtgtcctacatcttgatc
ttctctcagctcgtctgcgccctcttcttcaaaatgtccaacttctacggggccgccgcg
ggctggctgatcgggttggtgctgaggctgctcagcggagagccggcactggggttagcg
ccggtcatacacttcccgggatgcactctggaggatggctcttatgtccagtactatcca
gtgaagaccatctgcatgctctctgccatggccgccaacccgttgttctcctacctggcc
gccgtgcttttcaacaaagggttgcttcctgagaagtgggatgtgttcaaattgaaagcc
caggactccgctgacgccaagagatgcgatgagaaggaggcgctcgatgaaactgaatct
ccccgagatattttggagccgatgatcaccaccacatgttaa
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