Cyclopterus lumpus (lumpfish): 117744376
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Entry
117744376 CDS
T09199
Symbol
arid5b
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117744376 (arid5b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
ARID
117744376 (arid5b)
BRITE hierarchy
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GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
117744376
NCBI-ProteinID:
XP_034408495
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Position
15:complement(7065736..7134941)
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AA seq
1180 aa
AA seq
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MEPNSLKWVGSSCGLHGPYIFYKAFKFHRDGKPRILSLGDFFFVRCKPEDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDTPQGRTGIHGEHEVIAVSEKVIVRLEDLVKWTVPDFSGW
THCLKAEPLKPSVLRELGTNGRREALHRYRESTLTSGLNFKDVQRERAQLGQEEDGRKVL
VLSYPQYCRFRSVLVRLREQPSSLLIDHTVLALGGIAALGGSTRILYCRDTFEHPALLQN
ESICDEFAPNLKGRPRKKKLSISQRRDSQGHGQGSSGSTQGSTVVAAQDPCSPDSKTTIK
VKPNCKMVPNGRIHPAAKHRAYGLSKKSSAEEKERGKDKEKEKEERSEREENKEEETSEE
SRAEEQAFLVELYKYMKERDTPIERIPFLGFKQINLWTMFEAAQKLGGYELITVRRQWKH
VYDELGGNPSSTSAATCTRRHYERLLLPYERHVKGEQDKPLPFVKPKKQEGGQEKASGAK
AKGVGAKKFKGSNNPKLGSKKDRGEAVKDQEQSQDSKEKEENHELPTDIEEEVSLRDEPI
VIEEEELHVTLKEEESLAVEQPSSLCPKESDCRAPHAGLSLHTGPGPRPEWRQISEAFQA
KLSCEQQIEGHFIPKIPYLPHRWDQNRPAGHVALPEPSSRVKDSIESHGGRVGKVLPMCK
QADRQCIDLSTDSFPEKEHYVAIKKESTQNPAQTAAYCKSSQGVMSPLAKKKLLSQVCES
NPFSFTSPSLQPLHPTATSSLPVVSVPEREREKRKSDEEVVGQRLGCVSDSTPEVAPIFR
PSVIQHAQSSKPHQQAPSGPTERSAAGELSETYSCRTSRHLQPQVNPPWQPYLPQAHAQD
GVENAGETLLQGPASQPRSYTGDCYSSPHLHSLYRQTESCLSQERMVGFPNGDRRERYIR
DHEGSFVCGGLEQEGLAYRSHYCDRTQTHIERREADDEPRDFTISKPLSQRGSSFSKPSF
CNLPYPIMHQGLDSHPKACRVPPMTISPPKQNPAESSQTFHSPKALSESSLASPIRPSKR
SLVELEGEDVPERKVRVVTPVHPAGAIRRSDPEELKPAEPAHAVHLNNHLPEGHPTTTYP
PHLYTAMYPPGSLVSPGDVLHQHPGLQYLKSQSAVSPLMPPLAFHSMMFHRQLLAASPSP
HHFYRHPGGAALYGDLLHHLYPLSTLPPPQLSSVHPSTRL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcgtcttgcggtttacatggaccatatata
ttctataaagcctttaaatttcaccgggacggcaaaccgaggattctgtctctcggagac
tttttcttcgtcagatgtaaaccggaggatcctatttgcatagcggagcttcagctgctc
tgggaagaaagaacaagcaagcaacttttatcgagctccaaactttattttctacccgag
gatactccccagggacggacgggcatccacggagagcacgaggtaattgcagtgtctgag
aaggtgattgtgcggctggaggacttggtgaagtggacggtaccagacttctcaggatgg
acccactgtctgaaggccgagcctctcaaaccctctgtgcttcgggagctcgggaccaac
gggaggcgggaggccctccaccgctaccgggagagcaccctgaccagcggactcaacttc
aaggatgtccagcgggagagggcacagctgggccaggaggaggatgggcggaaggttctg
gtcctcagttacccccagtattgccggttccgctcggttttggtgcggctcagagagcag
ccgtcctctctgctcatagaccacacggtgctcgcgctgggcggcatcgctgcgttgggc
ggcagcacgaggatcctgtactgccgggacaccttcgaacatccggccctgctgcagaac
gagagcatctgtgacgagttcgctccgaaccttaaggggcgaccgaggaagaagaagctg
tccatctctcagaggagggactcccagggtcacggtcaaggttcatcggggtcaacccag
ggctcaacagtagtggcagctcaggacccctgcagcccggacagcaaaactactatcaag
gtcaaacctaactgtaaaatggtacccaacggaagaatccacccggcagccaaacacagg
gcctacggcctcagcaagaaatcctcagctgaggagaaggagcgagggaaggacaaggag
aaggaaaaagaggagaggagcgagagggaggaaaataaagaggaggaaacatcagaggag
agccgagcggaggagcaagcattcttagtagagctctacaagtacatgaaagaaagagac
acgcccatagagaggatccccttcctcggcttcaaacagatcaacctttggaccatgttt
gaagctgctcagaaactaggaggatatgagttgatcacagtccgcagacagtggaagcat
gtctatgatgaattgggcgggaacccaagcagcacaagtgccgccacatgtacacggaga
cactacgagaggctcctccttccctatgagaggcacgtaaaaggcgagcaggacaagccc
ctccccttcgtcaaacccaagaagcaggagggcggccaagagaaggcttcaggagccaaa
gccaaaggagtgggggccaagaaattcaaaggctccaacaatcccaagctggggagtaaa
aaggacagaggggaggcagtgaaagaccaagaacaatcacaggactccaaggagaaagag
gagaaccatgagctccccacagacatagaagaggaggtatctctgagagacgaaccaatt
gtaatagaggaggaagagttacacgttaccctaaaggaagaggagtcgttggcagtggag
cagccatcttcactctgtcccaaagagtcagactgcagagccccacatgctggtttgtcc
ctgcacacggggcccggtccccggcctgaatggaggcaaatcagcgaggccttccaagcg
aaactctcatgtgaacagcaaattgaaggacatttcattcctaaaatcccttacctgcct
caccgttgggatcagaacagacctgctggacatgttgctctgcccgagccctcttccagg
gtcaaagactccatagaaagtcacggtgggagggtggggaaagtgttaccgatgtgtaag
caggcagacagacagtgtatagacttgagcacagactccttcccagagaaagaacactat
gtggccataaagaaggagtccacccagaaccctgcacagacggctgcctactgcaaatcc
agccaaggtgtcatgtctcctttagccaaaaagaagctcctctcccaagtgtgtgagtcc
aaccctttctcctttacgtctccttctcttcagccgctacatcccacagcgacttcctct
ctccctgtcgtatcagtacctgaaagggagagggagaagaggaagagtgacgaggaggtg
gtaggacagaggcttgggtgtgtgtcagacagcaccccggaggtagcgcccatattcagg
ccatcagtcatccagcacgcccagagcagcaagcctcaccaacaagcccccagtgggccc
accgagaggagcgctgccggggaactctcagagacgtacagctgccggaccagccgtcac
ctccagcctcaagtcaatccgccgtggcagccctatcttccccaagcccatgcccaggat
ggtgtggagaatgccggggagacgctactccagggcccagcttctcagccccggagctac
acaggcgactgctactcctcccctcacctccacagtctgtacaggcaaactgagagctgc
ctgagtcaggagaggatggttggcttccccaacggagatcggagagagcgctacatcaga
gaccatgaaggcagctttgtctgtggcggcctggagcaagagggcttggcctacagatct
cactactgtgacaggactcaaacacacatagagaggagagaggcagacgatgagcccaga
gactttacgatctcgaaacctctctctcagagggggtcctccttctcgaagccctctttc
tgcaatctcccgtatcccatcatgcaccagggtttggattcccaccctaaggcgtgcaga
gttcctcccatgaccatctctccccccaaacagaacccagcagagtcatcgcagacattt
cacagcccgaaagcgttgagcgaatcatccctcgccagccccattcgacccagtaagcga
agcctcgtggaactcgagggcgaggatgttccagaaaggaaggtccgcgtggtgacgcca
gtccacccagccggagccatccgacgcagcgacccggaagagcttaaaccagccgagccg
gcccacgccgttcacctcaacaaccatctccctgagggccacccaaccactacctaccct
ccacatctctacactgccatgtacccacccggcagcctggtctccccaggagacgtgctg
caccagcacccaggtctgcagtacctgaagagccagtcggcagtgtctcccctcatgccc
ccgttagccttccactccatgatgtttcacaggcagctgctggccgccagccccagcccg
caccacttctacaggcacccgggcggggcagcactgtacggggacctactgcaccacctg
taccctctctccaccctcccaccacctcagctgtcctcggtacaccccagcaccagactg
tga
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