KEGG   Cyclopterus lumpus (lumpfish): 117745017
Entry
117745017         CDS       T09199                                 
Symbol
itga8
Name
(RefSeq) integrin alpha-8 isoform X1
  KO
K06584  integrin alpha 8
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04510  Focal adhesion
clum04512  ECM-receptor interaction
clum04514  Cell adhesion molecules
clum04810  Regulation of actin cytoskeleton
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117745017 (itga8)
   04514 Cell adhesion molecules
    117745017 (itga8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117745017 (itga8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117745017 (itga8)
   04810 Regulation of actin cytoskeleton
    117745017 (itga8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clum04515]
    117745017 (itga8)
Cell adhesion molecules [BR:clum04515]
 Integrins
  Integrin alpha subunits
   117745017 (itga8)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 117745017
NCBI-ProteinID: XP_034408861
Ensembl: ENSCLMG00005014007
LinkDB
Position
16:complement(9429410..9464512)
AA seq 1055 aa
MERVRNSASSVEMFILGVLSVLWPALSGVLSFNLYAEHPTVYKGPDGSYFGYSVDFYQAS
ADSNTISVLVGAPKANTSQPGIVEAGAVYYCPWPGLPDSCRQIPFDNSNNRMIKVNGTRE
PLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKLSGEKDPVGTCYVAVQNFSAYAEYSP
CRTNDPDPEGQGFCQAGFSVDFTKEGMLVVGGPGSFYWQGQVMTAGIAEILNGYSLKAVL
RRVPGEKHTRAAEDTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAMINSTNL
TFIQNFTGEQMASYFGYSVAVTDLNGDGTDDVLVGAPLYMEREMESKPREVGRVYLYLQM
APLTFSKPVALTGTHTFGRFGTAIAPLGDINQDGYNDVAVGCPFGGEERGGRVLIFNGNQ
AVATQGLTLSQELRAAGTPSSSLPGYGFTLRGGQDLDNNQYPDLIVGAFGAAEVSLYRSR
AVVSVEAAMILTPRILNPDDRQCHLPQTDIMVTCLKVDVCAAVSGVGIPSAVDLRAELQL
DWLKGTRGGVKRILFLDTQQPQRTGLLKLGHNSPHACLSYTIYLREEEDFRDKLTPISLA
LNYSLATPVHGQNLPPVLNHYSSTFLQEHAYILLDCGDDNICIPDLQLSASMDRSELVIG
DDNLVMLTITAVNRGEGAYETELHTLIPPEADYIGVERRVESLSQLNCEYKMVNDSRRVV
CDLGNPMVAGTELSVGLRFSVQRLEDAGPKISFELQIHSSNKDNSDSNPVSLNLSIIAKA
QLDLRGVSHPSQVVLPFPRWEPKEKPVKEDDVGPQVTHIYELHNFGPSSIRDAELQVGWP
SRFRDENLLYAMEIQTDGPISCRTNTSLNPLGLQISSLQDTPELLGFLRNASASSHRHKR
STSAAEGYAGKTLNCTNISCLKIICIVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYMLN
STVSFIVTALPYRIQPSTLPQHSTSMGTLVLWGTPDVSFAVPLWVIILAILLGLLVLAML
TLAMWKCGFFDRARPPADDNVSDQEQLTSDQTGDA
NT seq 3168 nt   +upstreamnt  +downstreamnt
atggagcgcgtacggaacagtgcttcctccgttgagatgtttattctcggggtgctgtcg
gttctctggccggcgctaagtggagttctgagttttaatctgtatgcagagcaccctacc
gtttacaaaggacctgatggaagttatttcggctattctgtggacttctaccaagcttcc
gccgacagcaacacgatcagtgtattggttggggctcccaaagcgaacacctctcagccc
ggcattgtggaggctggggctgtctactactgcccctggcccgggctgccggacagctgc
agacagataccttttgataattccaataacagaatgataaaggtaaacggcactagagag
cctctggagtttaagtcgcaccaatggtttggagcatctgtcaggacgcacaaaggaaaa
gtggtggcatgtgctcccctctaccactggcggacagtgaaactcagtggggagaaggac
cccgtgggaacctgctatgtggccgtccagaatttcagcgcctacgcagagtactcgccc
tgcaggaccaatgatccagacccagagggacaagggttctgccaggctggtttcagtgtg
gatttcaccaaggaaggaatgctggtagtaggaggacctggaagcttttactggcaaggt
caggtaatgacagcgggtatagctgagatactgaacggctactctttgaaggcagtcctg
agacgggttccaggagagaaacatacgcgagctgctgaagacacacacgacgacagctac
cttggttactctgtggcagtgggggagtttacaggagactctgaacaagagctgatagct
ggagtcccgagaggagcacagaactttggatatgtggcaatgatcaactccactaatctg
accttcatccagaacttcacgggggaacagatggcctcatattttggctactcggtagct
gtcaccgacctgaatggagatgggaccgacgatgtgctggttggagcacccctctacatg
gagagagagatggagagcaaacccagagaggtggggagagtgtacctgtacctgcagatg
gccccgctcactttctccaaacctgttgcactaaccggcacacacacctttgggcgcttc
ggcacagctatagcacccctgggagacatcaaccaggatggatacaatgacgtggcggtg
ggctgtccgttcggaggcgaggagcgtggaggcagagtattgatctttaatggtaaccaa
gccgtagccacgcaaggcctgacactgagccaagagctaagagcagccgggacccccagt
agcagcttgcctggatatggatttactctaagagggggccaagacctggacaacaatcag
tatcccgatctaatcgtgggggcgttcggggcagctgaggtgtccctgtacaggtctcga
gctgtggtgtccgtggaagctgcaatgatcttgactcccagaatcctgaaccccgatgac
cgacagtgtcacctgcctcaaacagatatcatggttacctgtcttaaggtggacgtgtgt
gcagcagtgagtggagtggggatccccagcgctgtcgacctgagagcagagctgcagctg
gattggttgaaaggcaccagaggtggagtcaagagaattttgttcctggacacccagcag
cctcagcgcactgggctgctaaaattgggacacaacagcccacatgcatgtctgagctac
accatttacctgagagaggaggaggatttcagggacaaattgaccccaatctcactggct
ctgaactacagcttggctacacccgttcatggccaaaacctcccacctgtcctcaaccat
tacagcagcacattccttcaagagcatgcctacattctcctggactgcggtgacgacaat
atttgtatccccgacctccagctctctgccagcatggaccgctcagagctggttattgga
gacgacaatctggtaatgttgaccattactgcggtgaaccgaggagagggagcctatgag
acggagctccacacactgataccaccagaggctgactatattggagtagaacgcagagtg
gagtccttatctcagctgaactgcgagtacaagatggtcaatgactccagaagggttgtg
tgtgacctcgggaacccaatggtggctgggacagagctctctgttggtttgaggttttct
gtccaaaggctggaagatgcaggaccaaagatcagctttgagctacagatccacagctcc
aacaaagataactccgacagcaacccagtcagtttgaatctgtccatcattgccaaagct
cagcttgatttgcgtggggtgtctcatccctctcaggtggtgctgccgttcccgcgctgg
gagcccaaagagaagccggtcaaagaggacgacgtggggccgcaagtaacgcacatctat
gagctccataactttggtcccagcagtattcgggatgctgagctccaggtcggctggcct
tcccgtttccgtgacgagaacctgctgtatgccatggagattcaaaccgatggaccaatt
agctgccggacgaacaccagcctcaacccacttggccttcagatctcctctctccaggac
acacctgaattattgggcttcttgaggaacgccagcgcttcttctcatcgccacaaacga
tccacttctgccgctgaaggttatgccggtaaaaccttgaattgcaccaatatctcttgt
ctgaagatcatatgcatcgttggccggttggatcgcggtcagagcgccgtggtgaagatc
cgctcgagactctgggcgcacactttcctgcagcgacgtaacgacccctacatgctcaac
tctaccgtgtccttcatagtcaccgccctgccttaccgcatccaaccctccaccctgcct
caacactccacctcgatggggaccctggtgttgtggggtactcctgatgtgtcgtttgct
gttccactctgggtcatcatcctggccatactgctggggctgctggtgctggctatgtta
acattagctatgtggaagtgtggtttctttgaccgggcgcggccaccagctgacgataac
gtctccgaccaggagcagctgacatctgatcaaacaggggacgcctaa

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