Cyclopterus lumpus (lumpfish): 117745017
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Entry
117745017 CDS
T09199
Symbol
itga8
Name
(RefSeq) integrin alpha-8 isoform X1
KO
K06584
integrin alpha 8
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04510
Focal adhesion
clum04512
ECM-receptor interaction
clum04514
Cell adhesion molecules
clum04810
Regulation of actin cytoskeleton
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117745017 (itga8)
04514 Cell adhesion molecules
117745017 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117745017 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117745017 (itga8)
04810 Regulation of actin cytoskeleton
117745017 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117745017 (itga8)
Cell adhesion molecules [BR:
clum04515
]
Integrins
Integrin alpha subunits
117745017 (itga8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
117745017
NCBI-ProteinID:
XP_034408861
Ensembl:
ENSCLMG00005014007
LinkDB
All DBs
Position
16:complement(9429410..9464512)
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AA seq
1055 aa
AA seq
DB search
MERVRNSASSVEMFILGVLSVLWPALSGVLSFNLYAEHPTVYKGPDGSYFGYSVDFYQAS
ADSNTISVLVGAPKANTSQPGIVEAGAVYYCPWPGLPDSCRQIPFDNSNNRMIKVNGTRE
PLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKLSGEKDPVGTCYVAVQNFSAYAEYSP
CRTNDPDPEGQGFCQAGFSVDFTKEGMLVVGGPGSFYWQGQVMTAGIAEILNGYSLKAVL
RRVPGEKHTRAAEDTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAMINSTNL
TFIQNFTGEQMASYFGYSVAVTDLNGDGTDDVLVGAPLYMEREMESKPREVGRVYLYLQM
APLTFSKPVALTGTHTFGRFGTAIAPLGDINQDGYNDVAVGCPFGGEERGGRVLIFNGNQ
AVATQGLTLSQELRAAGTPSSSLPGYGFTLRGGQDLDNNQYPDLIVGAFGAAEVSLYRSR
AVVSVEAAMILTPRILNPDDRQCHLPQTDIMVTCLKVDVCAAVSGVGIPSAVDLRAELQL
DWLKGTRGGVKRILFLDTQQPQRTGLLKLGHNSPHACLSYTIYLREEEDFRDKLTPISLA
LNYSLATPVHGQNLPPVLNHYSSTFLQEHAYILLDCGDDNICIPDLQLSASMDRSELVIG
DDNLVMLTITAVNRGEGAYETELHTLIPPEADYIGVERRVESLSQLNCEYKMVNDSRRVV
CDLGNPMVAGTELSVGLRFSVQRLEDAGPKISFELQIHSSNKDNSDSNPVSLNLSIIAKA
QLDLRGVSHPSQVVLPFPRWEPKEKPVKEDDVGPQVTHIYELHNFGPSSIRDAELQVGWP
SRFRDENLLYAMEIQTDGPISCRTNTSLNPLGLQISSLQDTPELLGFLRNASASSHRHKR
STSAAEGYAGKTLNCTNISCLKIICIVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYMLN
STVSFIVTALPYRIQPSTLPQHSTSMGTLVLWGTPDVSFAVPLWVIILAILLGLLVLAML
TLAMWKCGFFDRARPPADDNVSDQEQLTSDQTGDA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtacggaacagtgcttcctccgttgagatgtttattctcggggtgctgtcg
gttctctggccggcgctaagtggagttctgagttttaatctgtatgcagagcaccctacc
gtttacaaaggacctgatggaagttatttcggctattctgtggacttctaccaagcttcc
gccgacagcaacacgatcagtgtattggttggggctcccaaagcgaacacctctcagccc
ggcattgtggaggctggggctgtctactactgcccctggcccgggctgccggacagctgc
agacagataccttttgataattccaataacagaatgataaaggtaaacggcactagagag
cctctggagtttaagtcgcaccaatggtttggagcatctgtcaggacgcacaaaggaaaa
gtggtggcatgtgctcccctctaccactggcggacagtgaaactcagtggggagaaggac
cccgtgggaacctgctatgtggccgtccagaatttcagcgcctacgcagagtactcgccc
tgcaggaccaatgatccagacccagagggacaagggttctgccaggctggtttcagtgtg
gatttcaccaaggaaggaatgctggtagtaggaggacctggaagcttttactggcaaggt
caggtaatgacagcgggtatagctgagatactgaacggctactctttgaaggcagtcctg
agacgggttccaggagagaaacatacgcgagctgctgaagacacacacgacgacagctac
cttggttactctgtggcagtgggggagtttacaggagactctgaacaagagctgatagct
ggagtcccgagaggagcacagaactttggatatgtggcaatgatcaactccactaatctg
accttcatccagaacttcacgggggaacagatggcctcatattttggctactcggtagct
gtcaccgacctgaatggagatgggaccgacgatgtgctggttggagcacccctctacatg
gagagagagatggagagcaaacccagagaggtggggagagtgtacctgtacctgcagatg
gccccgctcactttctccaaacctgttgcactaaccggcacacacacctttgggcgcttc
ggcacagctatagcacccctgggagacatcaaccaggatggatacaatgacgtggcggtg
ggctgtccgttcggaggcgaggagcgtggaggcagagtattgatctttaatggtaaccaa
gccgtagccacgcaaggcctgacactgagccaagagctaagagcagccgggacccccagt
agcagcttgcctggatatggatttactctaagagggggccaagacctggacaacaatcag
tatcccgatctaatcgtgggggcgttcggggcagctgaggtgtccctgtacaggtctcga
gctgtggtgtccgtggaagctgcaatgatcttgactcccagaatcctgaaccccgatgac
cgacagtgtcacctgcctcaaacagatatcatggttacctgtcttaaggtggacgtgtgt
gcagcagtgagtggagtggggatccccagcgctgtcgacctgagagcagagctgcagctg
gattggttgaaaggcaccagaggtggagtcaagagaattttgttcctggacacccagcag
cctcagcgcactgggctgctaaaattgggacacaacagcccacatgcatgtctgagctac
accatttacctgagagaggaggaggatttcagggacaaattgaccccaatctcactggct
ctgaactacagcttggctacacccgttcatggccaaaacctcccacctgtcctcaaccat
tacagcagcacattccttcaagagcatgcctacattctcctggactgcggtgacgacaat
atttgtatccccgacctccagctctctgccagcatggaccgctcagagctggttattgga
gacgacaatctggtaatgttgaccattactgcggtgaaccgaggagagggagcctatgag
acggagctccacacactgataccaccagaggctgactatattggagtagaacgcagagtg
gagtccttatctcagctgaactgcgagtacaagatggtcaatgactccagaagggttgtg
tgtgacctcgggaacccaatggtggctgggacagagctctctgttggtttgaggttttct
gtccaaaggctggaagatgcaggaccaaagatcagctttgagctacagatccacagctcc
aacaaagataactccgacagcaacccagtcagtttgaatctgtccatcattgccaaagct
cagcttgatttgcgtggggtgtctcatccctctcaggtggtgctgccgttcccgcgctgg
gagcccaaagagaagccggtcaaagaggacgacgtggggccgcaagtaacgcacatctat
gagctccataactttggtcccagcagtattcgggatgctgagctccaggtcggctggcct
tcccgtttccgtgacgagaacctgctgtatgccatggagattcaaaccgatggaccaatt
agctgccggacgaacaccagcctcaacccacttggccttcagatctcctctctccaggac
acacctgaattattgggcttcttgaggaacgccagcgcttcttctcatcgccacaaacga
tccacttctgccgctgaaggttatgccggtaaaaccttgaattgcaccaatatctcttgt
ctgaagatcatatgcatcgttggccggttggatcgcggtcagagcgccgtggtgaagatc
cgctcgagactctgggcgcacactttcctgcagcgacgtaacgacccctacatgctcaac
tctaccgtgtccttcatagtcaccgccctgccttaccgcatccaaccctccaccctgcct
caacactccacctcgatggggaccctggtgttgtggggtactcctgatgtgtcgtttgct
gttccactctgggtcatcatcctggccatactgctggggctgctggtgctggctatgtta
acattagctatgtggaagtgtggtttctttgaccgggcgcggccaccagctgacgataac
gtctccgaccaggagcagctgacatctgatcaaacaggggacgcctaa
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integrated database retrieval system