Cyclopterus lumpus (lumpfish): 117745038
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Entry
117745038 CDS
T09199
Symbol
abcb4
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette, sub-family B (MDR/TAP), member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117745038 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117745038 (abcb4)
04147 Exosome [BR:
clum04147
]
117745038 (abcb4)
04090 CD molecules [BR:
clum04090
]
117745038 (abcb4)
Enzymes [BR:
clum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117745038 (abcb4)
Transporters [BR:
clum02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117745038 (abcb4)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117745038 (abcb4)
CD molecules [BR:
clum04090
]
Proteins
117745038 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
Rad17
RsgA_GTPase
G-alpha
AAA_28
AAA_15
AAA_29
AAA_7
DUF815
PRK
AAA_30
tRNA_lig_kinase
Motif
Other DBs
NCBI-GeneID:
117745038
NCBI-ProteinID:
XP_034408903
Ensembl:
ENSCLMG00005007029
LinkDB
All DBs
Position
16:complement(10267687..10280523)
Genome browser
AA seq
1286 aa
AA seq
DB search
MDVKDEKDKLAAANHEQKGYISESKDNKKEKEKKTKIPMVGPIGVFRFAKGLDIVMILAG
MFCAIVNGVMLPLMCIVFGDMTDSLVNTSPGGQIHSNNTNVTYIPRNSTLEADMTQYAIS
YSILGFVVLVVAYGQVAFWTLSAGRQTKRIRKLFFHCIMKQDIGWFDVSETGELNTRLTD
DVYKIQEGIGDKAGKLIQAVSTFLASFIIGFSKGWKLTLVILAVSPALALSAGIFSKFLA
TFTSKEQAAYAKAGAVASEVISAIRTVFAFSGQEREIKRYIKNLEDAKNVGIKKATYANF
AFGFNFLMIYLAYALAFWYGSTLILSNEYTIGTVLTVFFVVLIGAFTLGQASPNIETFSS
ARGAAHKVYSIIDHKPIIDSYSEAGFKPDSITGNIEFKNIHFSYPSRPEIKVLNNLSLSV
ESGQNIALVGSSGCGKSTTIQLLQRFYDPQEGSVTIDGHDIRSLNVRYLRDMIGVVSQEP
ILFATTIAENIRFGRPDVTQYDITQAAKESNAYNFIMALPDKFETMVGDRGTQMSGGQKQ
RIAIARALVRNPKILLLDEATSALDAESETIVQDALDKVRQGRTTIIVAHRLSTIRSVDV
IAGFKQGEVVELGTHSQLMKEQGIYHTLVTMQTFQNVEESEETALEHSVDKNSPLAKTRS
QSSVHNRKSTRSTSFASSEEEKEEKQKLKDYGIDENENVPLLSFPQLMHLNRNEWPYILV
GTICAIFNGAMQPLFAVIFSKIITIFAEPDPNVIRQKSEFFSMMFIVIGVITFVAMFLQG
FCFGKSGEMLTLKLRRDAFKSMMRQDLSWYDNHKNSVGALTTRLATDAAQVQGATGIRMA
TLAQNVANMGTSVVISFVYGWQLTLLVLAVVPVVAAAATFEMRALTGYAAQDKKELEKSG
KIATEAIGNIRTVVSLNIEPKFESLYQENLEVPYKNSQKNAHVHGLSFSITQAMIYFAYA
GCFRFGAWLIVRGMMNAEGVFLVISAILYGAMALGEANSFAPNYAKAKLSASHLMMLLHK
KSAIDNLSQEGESPDKFEGNVHFDGVFFNYPSRPDVPILQGLNLKVTKGETLALVGSSGC
GKSTTIQLLERFYDPREGRVLVDNINAKKLNIQWLRSQIGIVSQEPVLFDCTLSENIAYG
DNSRTATMAEIQEAAKAANIHNFIDSLPKKYDTQAGDKGTQLSGGQKQRIAIARAILRNP
KVLLLDEATSALDTESEKVVQEALDEASKGRTCIIVAHRLSTIQNADRIAVFSGGGVIEL
GTHQQLLAQKGVYHMLVNKQMGHXRK
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaagacgaaaaggacaagttggctgcagccaatcacgaacaaaaaggatat
ataagtgaaagcaaggacaataaaaaggagaaagaaaaaaagacaaagattcccatggtt
ggccccattggcgtgtttaggtttgcaaaaggcttggacattgtcatgatcctggcaggg
atgttctgtgccatcgtcaacggagtaatgcttcctctcatgtgcattgtgtttggggac
atgacagacagccttgtaaatacctcccctgggggacaaatccactccaacaacaccaat
gtcacctacataccaagaaacagcaccttagaggcagacatgacacaatatgccatttcc
tactccatattgggttttgtcgtgctggtggtcgcctatgggcaggtggccttctggacc
ctgtcggccgggcggcagacaaaacgcatccgcaagctgttcttccactgcatcatgaag
caggacatcggctggttcgatgtctctgaaacaggagagctcaacacacgtctcacagat
gatgtctataagatccaagagggtattggtgacaaggctgggaagcttattcaggccgta
agcaccttcctcgcatccttcatcatcggcttcagcaaaggctggaaactcactctggtc
atcctggctgtgagccctgcacttgccctttcggctggaattttctcaaagtttctcgcg
actttcacttctaaagagcaggctgcttatgccaaagctggagctgtggcatcagaggta
atctctgctatcaggacagtgtttgccttcagtggtcaagaaagagaaatcaagagatat
attaagaacttggaggatgcaaagaacgtgggaataaagaaggcgacatatgccaatttt
gcttttggcttcaacttcctgatgatctacctggcctacgctctagccttctggtacgga
agtacactcatccttagcaatgaatacaccattggaactgtactcactgtgttcttcgtt
gtgcttattggagcgttcactctgggacaggcctctcctaacatcgagaccttttcaagt
gcccgaggagctgcacataaagtgtacagcattattgatcataaaccgataatcgacagc
tattcagaggccggcttcaagcctgattccattacaggaaacatagagttcaagaacatc
cacttcagctacccctcaaggccggagatcaaagtactgaataacttgtctctgagcgtg
gagagtgggcagaacattgccttggttggtagtagcggctgtggtaaaagcaccacgatc
cagctgctgcagaggttctacgatcctcaagaaggatctgtgactattgacggtcacgac
atccgttctcttaacgtccgctacctgagggacatgattggagtggtgagccaggagccc
atcctctttgccaccaccatcgctgagaacatcagattcggacgacctgacgtgacgcag
tatgatatcacgcaagctgccaaggagtctaatgcttacaacttcattatggcccttcct
gataagtttgagacgatggtcggtgaccgagggactcaaatgagtggaggacagaagcag
aggattgcgattgctcgagctctagtccgcaaccccaaaatcctcctgttggacgaagcc
acatctgctcttgatgctgagagtgagaccattgtgcaagatgcactcgacaaggtccgg
cagggtcgtaccaccataattgttgcccaccgcctttcaaccatccgaagcgtggacgtc
atcgctggctttaagcaaggggaggttgtagagctggggactcacagtcaactgatgaaa
gaacagggaatctaccatacactggtcaccatgcagacctttcaaaatgttgaagagtcg
gaggagacggcgctggagcattctgtggacaagaacagcccgttggccaagacccgttct
cagtcctctgtgcacaacaggaagtccacaagaagcacctcctttgcttcctcggaggaa
gagaaagaggagaaacaaaagttgaaggactacgggatagacgaaaatgaaaatgttccc
ctcctgtcgttccctcaactgatgcacctcaaccgtaacgagtggccgtacattttggtc
gggaccatctgtgccatcttcaacggagctatgcaaccattgtttgctgtcatcttctcc
aagatcatcactatatttgcagaacccgatccaaacgtgatcaggcaaaaatctgaattc
ttttctatgatgtttattgttattggagttataactttcgtcgccatgtttctacagggc
ttctgttttggtaaatctggggagatgctgacccttaaactgagacgcgatgcctttaag
tccatgatgagacaggacctcagctggtatgacaaccacaaaaacagtgttggagcgctc
actacgagactggccacagacgcagcccaagtgcaaggagccacaggaatacgtatggcc
acgctggcccagaacgtagccaacatgggcacctctgtggtcatctcctttgtgtacggc
tggcagctgaccttgctcgtcctggctgtggtgcccgtcgtagcagcggctgcaactttt
gagatgcgggcgcttaccggatacgccgctcaggacaagaaggagctcgagaagtctgga
aagattgctacagaggccattggaaatatccgtactgtcgtctctctaaacatagaaccc
aagtttgagtctttgtatcaggaaaaccttgaagtaccatacaagaactctcagaaaaac
gcccatgtgcatggtttatccttctccattacccaggccatgatctactttgcttacgca
ggctgtttccgctttggagcttggctcattgtgagaggaatgatgaatgctgagggagta
ttccttgtcatttctgctatactgtacggtgccatggctctcggagaggccaactccttc
gctccaaactatgcgaaggccaaactctcagcttcccacctcatgatgctgctgcacaaa
aagtccgccatcgacaatctctcgcaggagggggagtcaccagacaaattcgagggcaac
gtgcacttcgacggtgttttttttaactacccgtcacgccctgatgtgcccatcctccaa
gggctgaatctcaaggtgaccaagggagagactttggccttggtggggagcagcggctgt
ggaaagagcaccaccatccagctgctggagaggttctacgatcccagagaggggagagtg
ctggttgacaacataaatgcaaaaaagctgaacatccagtggttgaggtctcaaatcggc
atcgtatcccaggagcctgtgctgttcgactgcaccttgagtgaaaacatcgcctatgga
gacaacagccgcaccgcaaccatggcggagattcaggaagctgctaaagcagccaacatt
cacaacttcatcgatagcctgccaaagaagtacgacactcaggcaggtgataaaggaact
cagctgtcaggtggccagaagcagcgtatagccatcgcccgagccatcctccgcaacccc
aaagtgttgctcctggacgaggccacatctgcactcgacactgagagtgagaaggtggtg
caggaggcgctggacgaggccagtaagggccggacgtgtatcatcgtggctcaccgtctg
tccaccatccaaaatgcagaccgcatcgctgttttcagtggaggaggggtgatcgagctg
gggacacatcaacagctgctggcccaaaagggagtctaccacatgctggtcaacaaacag
atgggtcattagaggaaataa
DBGET
integrated database retrieval system
