Cyclopterus lumpus (lumpfish): 117745052
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Entry
117745052 CDS
T09199
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03030
DNA replication
clum03420
Nucleotide excision repair
clum03430
Mismatch repair
clum03440
Homologous recombination
clum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117745052 (rpa2)
03420 Nucleotide excision repair
117745052 (rpa2)
03430 Mismatch repair
117745052 (rpa2)
03440 Homologous recombination
117745052 (rpa2)
03460 Fanconi anemia pathway
117745052 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clum03032
]
117745052 (rpa2)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117745052 (rpa2)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
117745052 (rpa2)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
117745052 (rpa2)
MMR (mismatch excision repair)
117745052 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
117745052 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
LexA_DNA_bind
TAD2
Motif
Other DBs
NCBI-GeneID:
117745052
NCBI-ProteinID:
XP_034408934
Ensembl:
ENSCLMG00005006877
LinkDB
All DBs
Position
16:complement(14142088..14146968)
Genome browser
AA seq
309 aa
AA seq
DB search
MRCMLSLARGTTRKCSEQWLLYLLVNFIKLQGTSMWNQGGYNESSAVGSYTQSPGGFASP
SLSQGGEKKGRTRASQIIPCTVSQLMSASQADEAFKVGDVEVAQVTIVGIIRSIDKSMTN
IQYKVDDMTGAPMDVKQWVDTEDPGVDSTVLPPGTYVKISGNLRSFQNHRSVVAFGVRPL
EDMNEITSHMLEVVQAHMALSKPQTMSSAGGGMSSDVTPNSRLAVESTGGSYAGANDMVN
NGLSANQNQVLSLIRGCQDQKGISVQDLKKRLGVTSMPLIKQAVEFLSNEGHIFSTIDED
HYKSTDNDD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtatgttgagtttggcgcgcgggactacaaggaagtgttccgaacagtggctg
ttgtacctactcgtgaactttattaaattacaaggaaccagcatgtggaatcagggagga
tataatgagtcgagtgcggtcggaagctacactcagtctccggggggctttgcatctcct
tccctatcccagggaggggagaagaaagggagaacccgtgcctcacagataatcccctgc
acagtgtctcagctgatgtctgcctcccaggctgatgaggccttcaaagtaggagatgtg
gaagtagcccaggttaccattgtgggtatcatcaggagcatcgacaaatccatgactaac
atccagtataaggttgacgacatgactggcgctccgatggatgtgaagcagtgggtagac
acggaggaccccggtgtggacagcactgtcctgcctccaggcacatatgtgaaaatctct
ggcaatctgcgctcctttcagaaccacagatctgtcgtggcatttggtgtcaggcccctg
gaggacatgaatgaaataacctcgcatatgctggaggttgttcaagcgcacatggcgctc
agcaaacctcaaaccatgtcgagtgctggaggaggaatgagcagtgacgttacgcctaat
tcacgactggccgtggaaagcaccggagggagctatgcaggtgctaacgacatggttaac
aatgggttaagcgcgaaccagaatcaggtgctgagtttgataagaggctgccaagaccaa
aagggcattagcgttcaagatctgaagaagagactaggtgtcacgagtatgcctttaata
aagcaagcagtggaattcctaagcaacgaaggtcacatcttttccaccatcgacgaagat
cactacaaatcaacagacaacgacgattag
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