KEGG   Cyclopterus lumpus (lumpfish): 117745077
Entry
117745077         CDS       T09199                                 
Symbol
stx17
Name
(RefSeq) syntaxin-17 isoform X1
  KO
K08491  syntaxin 17
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04130  SNARE interactions in vesicular transport
clum04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    117745077 (stx17)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117745077 (stx17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117745077 (stx17)
Membrane trafficking [BR:clum04131]
 SNARE
  Syntaxin (Qa)
   Stx-sER
    117745077 (stx17)
SSDB
Motif
Pfam: SNARE IncD Prominin C19orf12
Other DBs
NCBI-GeneID: 117745077
NCBI-ProteinID: XP_034409011
Ensembl: ENSCLMG00005004989
UniProt: A0A8C2WSP0
LinkDB
Position
16:9997650..10006857
AA seq 289 aa
MAEEGNKLTLRRLEAPIHKFIKVALPTDLERLQKHHNNILKYQQSQQWDRLHLEHINASR
TVQQLRANVREMEKLCTRVRAEDADALEALVRPVRDRASAAARDFLLLHSNPVPQPAPAT
PPAAQPSSCVSSSCHADDNMCEQIQLYLPEIPADQSAAESWDNLEEDLKELSGLVTEFSL
LVHSQQEKIDSIEDSVNTATTNVEEGTKSLGKAVGYKLTVLPVAGALLGGVLGGPLGLLA
GFKVAGLAAALGGGALGFASGKLVQKHRKAQVDLQMKQLTAPPESNKDK
NT seq 870 nt   +upstreamnt  +downstreamnt
atggcagaggaaggcaacaagctgacactgaggcgcctggaggcaccaatccacaagttc
attaaagtggctctacccacggacctggagaggctgcagaaacaccacaataacatactg
aagtaccaacaaagccagcaatgggaccggcttcatctggagcatatcaacgccagcaga
acggttcagcagttgagagctaacgtcagagagatggagaagctgtgcacgcgagttcgt
gctgaagacgctgacgctttggaagcgcttgtcaggccagtcagagatcgggcatcagcc
gccgcacgagacttcctgcttttgcactctaaccccgtgccgcagcctgcgccagcgaca
ccacctgccgctcagccgtccagctgtgtgtccagcagttgccacgctgatgacaatatg
tgcgagcaaattcagctttaccttccagaaatccctgctgatcagagcgcggctgagtcc
tgggacaacctggaagaggatctgaaggaactgagtggtttggtgacggagttctctctg
ctcgtccattcccagcaggagaagattgacagcatagaagacagcgtcaacacagccact
accaacgtggaggaggggaccaagagcctggggaaggcggttggctacaagttgacggtg
ttgccggttgccggggcgttgctgggcggtgtgttaggaggtccacttggcctgctggct
ggattcaaagttgcagggctggctgcggctctgggagggggggccctgggctttgcaagt
ggaaaactggtccagaaacaccgcaaagcccaagtggatctacagatgaaacaactgaca
gcgccgccggagtcaaacaaggacaaatga

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