KEGG   Cyclopterus lumpus (lumpfish): 117745083
Entry
117745083         CDS       T09199                                 
Symbol
ctnnb1
Name
(RefSeq) catenin beta-1
  KO
K02105  catenin beta 1
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04310  Wnt signaling pathway
clum04510  Focal adhesion
clum04520  Adherens junction
clum04916  Melanogenesis
clum05100  Bacterial invasion of epithelial cells
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117745083 (ctnnb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117745083 (ctnnb1)
   04520 Adherens junction
    117745083 (ctnnb1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    117745083 (ctnnb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117745083 (ctnnb1)
   05100 Bacterial invasion of epithelial cells
    117745083 (ctnnb1)
SSDB
Motif
Pfam: Arm ARM_ARMC5 Cnd1 HEAT_2 HEAT_EZ Adaptin_N ARMC9_ARM KAP Atx10homo_assoc Queuosine_synth
Other DBs
NCBI-GeneID: 117745083
NCBI-ProteinID: XP_034409028
Ensembl: ENSCLMG00005004892
LinkDB
Position
16:complement(4010561..4022738)
AA seq 782 aa
MASQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEDDVDNQ
VMYEWEQGFNQNFAQEQVQDIDGQYAMTRAQRVRAAMFPETLEEGMQIPSTQYDAANPTN
VQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKK
EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV
KMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCL
QILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG
GMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAA
GILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMA
QNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLV
RAHQDAQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQ
LLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFR
MSEDKPQDYKKRLSVELTSSLFRTEPMAWNETGDLGLDIGAQGEPLGYRQEDPSYRSFHS
GGYGGDSMGMEPMMDHDLGGVHHPGQDYPPVDGLPDLGHAQELIEGLPPGDSNQLAWFDT
DL
NT seq 2349 nt   +upstreamnt  +downstreamnt
atggcttcccaggctgatctgatggagctcgacatggccatggagccggaccgtaaggcg
gcagtcagccactggcagcaacagtcttacctggattcaggcatccattcaggggccacc
acaactgctccctccctcagtgggaaggggaacccggaagaagacgacgttgacaaccag
gtcatgtatgagtgggagcagggcttcaaccagaactttgcccaggagcaagtacaagac
atagacggtcagtatgccatgacgcgcgcccagcgggtgcgtgcagcgatgttcccagag
actctcgaggagggcatgcagatcccctccacacagtatgacgcagcaaaccccaccaac
gttcagaggctggcggagccctcgcaaatgctcaaacacgccgtggtcaatctgatcaac
taccaagacgacgcggagctggcgaccagagcaataccagaactcaccaaactactcaat
gatgaggaccaggtcgtagtaaacaaagcagcggtgatggtccaccagctctcaaagaaa
gaagcttctcgccacgccatcatgcgctcgcctcagatggtgtcggctattgtccggacc
atgcagaacacaaacgacgtggagacggctcgctgcaccgcggggacgctccacaacttg
tcccaccacagagagggcctgctggccatcttcaagtccggagggataccggctctagtt
aagatgctcggttcaccagtggactctgtcctgttctacgccattaccaccctccacaac
ctcctcctgcaccaggaaggagccaagatggcggtgcgtttagccgggggtcttcagaaa
atggtggctctgctcaacaagaccaacgtcaagttcttggccatcaccaccgactgtctc
cagattctggcctatggaaaccaggaaagcaagttgatcatcttggccagcggtggccca
caggcactggtcaacatcatgaggacttacacctacgagaagctgttgtggacgacgagc
cgcgttctcaaagttctgtcggtctgctccagtaacaagcccgccattgttgaagctgga
ggcatgcaggctctgggactccacctgacagaccccagccagagactggtccagaactgt
ctctggactctcaggaacttatcagatgctgccaccaaacaggaggggatggagggtctc
ctaggaactctggtccagctgctcggcagcgacgacattaacgtggtgacctgtgctgcc
ggcatcctgtctaacctgacctgtaacaactacaagaacaagatgatggtctgccaggtc
ggcggtattgaggcattagttcgcaccgtgcttcgggccggggacagagaagacatcaca
gaaccggccatctgtgccctgcgtcacctcacctctcgacaccaggacgcggagatggcc
cagaacgccgtccgactgcactacggcctgccggtggtcgtcaagctgctgcatccgccg
tcacactggccgctcattaaggcgacagtcggtctgatccgtaacttggctctgtgccct
gcaaaccacgctcccctgagggagcagggagccatcccccgactggtccagctgctggtc
agagcgcatcaagacgcacagagacgcaccagcatgggaggcacgcagcagcagtttgtg
gagggcgttcgtatggaggagattgtggagggctgcacaggagcacttcacatcctggcc
agagacgtccacaacagaatagtcatccgaggactcaacaccattccactctttgtacag
ctgttgtattctcccatcgagaacatccagcgtgtcgcagcaggcgtcctgtgtgagctg
gctcaggataaagaggctgccgaggccatcgaggccgagggcgccaccgcaccgctcact
gagctattgcacagccgcaacgaaggagtcgccacctacgctgcagcggttttgttccgc
atgtcggaggacaaaccccaagactacaagaagcgtctctctgtagaactcaccagttcg
ctcttcaggaccgagccgatggcctggaacgagaccggagacctaggtttggatattgga
gcacagggagagcctctgggctacagacaggaagacccgagctaccgttccttccattca
gggggatacggaggggactcgatgggtatggagcccatgatggaccatgatctgggtggg
gtccaccaccctggccaggactacccccctgtagatgggctgcctgacctgggacacgcc
caggaactgatagagggcctgccacctggcgactccaaccaactggcctggtttgatacc
gacctgtaa

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