KEGG   Cyclopterus lumpus (lumpfish): 117745101
Entry
117745101         CDS       T09199                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117745101 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117745101 (taf12)
   03036 Chromosome and associated proteins [BR:clum03036]
    117745101 (taf12)
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     117745101 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     117745101 (taf12)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     117745101 (taf12)
    STAGA complex
     117745101 (taf12)
    TFTC complex
     117745101 (taf12)
    SAGA complex
     117745101 (taf12)
    SLIK complex
     117745101 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10
Other DBs
NCBI-GeneID: 117745101
NCBI-ProteinID: XP_034409058
Ensembl: ENSCLMG00005005141
LinkDB
Position
16:13923046..13929175
AA seq 198 aa
MYGEEEKRETRITLDIEPKDLRRWSLRTVIYHICARLGLSLRTHTDGQFCSQLKHQSPSA
FPMATSMANSTGTAVKVVGTPGPAGRTSPEGSQVLSKKKLQDLVREIDPNEQLDEDVEEM
LLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIPGYGSDEIRPFKKAC
TTEAHKQRMALIRKTTKK
NT seq 597 nt   +upstreamnt  +downstreamnt
atgtatggagaagaagaaaaaagagagaccagaataacacttgacattgaaccaaaagat
ttacggaggtggtccctgcgaacggtaatctatcacatctgtgcccgtctcggactgtca
ctcaggactcacacagacggacagttttgctcacagttaaaacaccagagtccctccgct
ttccccatggccaccagcatggctaacagcaccgggacagcagtaaaggtcgttgggacc
cctggccctgctggaagaacgagtccggaaggatctcaggtgctcagtaagaagaagctg
caggacctggtgagggagatcgatccgaatgagcagctggatgaggatgttgaggagatg
ctgctgcagattgcagatgactttatagagagtgtagtgacagcggcctgtcagctggct
cgccatcgcaagtccaacaccttggaggtgaaggatgttcaattacatcttgagcgccag
tggaacatgtggattcctggttacggctccgatgagatccggccgtttaagaaggcttgc
accacagaggctcacaaacagagaatggcgctgatccgcaagacaaccaaaaaatag

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