Cyclopterus lumpus (lumpfish): 117745202
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Entry
117745202 CDS
T09199
Symbol
si:cabz01093077.1
Name
(RefSeq) C-C chemokine receptor type 4
KO
K04179
C-C chemokine receptor type 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117745202 (si:cabz01093077.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
clum04030
]
117745202 (si:cabz01093077.1)
04050 Cytokine receptors [BR:
clum04050
]
117745202 (si:cabz01093077.1)
04090 CD molecules [BR:
clum04090
]
117745202 (si:cabz01093077.1)
G protein-coupled receptors [BR:
clum04030
]
Rhodopsin family
Chemokine
CC Chemokine
117745202 (si:cabz01093077.1)
Cytokine receptors [BR:
clum04050
]
Chemokine receptors
CC Chemokine
117745202 (si:cabz01093077.1)
CD molecules [BR:
clum04090
]
Proteins
117745202 (si:cabz01093077.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF1634
FA_desaturase
Motif
Other DBs
NCBI-GeneID:
117745202
NCBI-ProteinID:
XP_034409245
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Position
16:5191072..5193901
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AA seq
345 aa
AA seq
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MNTSGDERLYELYSEDDNYTCDEDWGPELPDGSTVMLVLYYVVFCLSVIGNTTVLWVLLR
YIKLKTMTDVCLLNLALSDLILAITLPLWAYNYPSVAACRLMTGGYQLGFYSGMLFVTLM
SVDRYLAIVHAVAAMRARTLRYGVIASITIWVISVIMALPGVTFASLERNDDDNSSECHP
LYPEDRQRFWKILRNFSENTVGLFVCLPIMIFCYVKILVVLSRSRNAKKDRAVKLIFIIV
CVFVVCWVPYNVTVFLQTLQLVLDVLDTCKASKSIDSAVHFAEIIALFHCCVNPVIYAFV
GEKFRKSLGNVLTRSLCWRHESRGTFSARDTTEKETSNTPVKSDY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatcaggggacgagcgcctctacgagctctactcggaggatgataattacacc
tgcgatgaggattggggtccagaattgccggatggctccacggtcatgctggttctttac
tacgtggtgttttgtctaagtgtgataggcaacaccacggtgctctgggttctcctccgg
tacataaagctgaagaccatgacggacgtatgcctcctcaacttggccctgtctgacctc
attctggctataaccctgcccctctgggcctacaattacccaagcgtggcggcatgcaga
ctgatgacaggaggctatcagctgggtttctacagcgggatgttgtttgtgaccctgatg
agcgtggaccgctacctggccatcgtccacgccgtcgcagccatgcgggcccggacactt
cgctacggagtcatagcgagcatcaccatctgggttatctctgtcatcatggcactacct
ggggtgacattcgcttctttggagaggaacgacgacgacaacagctccgagtgccacccg
ctgtacccagaggacaggcagcgtttttggaagatactgcgaaacttcagcgagaacaca
gtgggcctcttcgtgtgcctccccatcatgattttctgctacgtgaaaatcctggtcgtg
ctgtccaggtccaggaacgccaaaaaggatcgagctgtgaagctaatattcatcatagtg
tgtgtgtttgtggtgtgctgggtcccctacaacgtcacggttttccttcagacactgcag
ctggtcctggacgtcctggacacatgcaaggcgtcgaaaagcatcgactcggccgtgcac
tttgctgagatcatcgcactgtttcactgctgtgtgaatccagtcatctacgcatttgta
ggggagaagtttaggaagtcgctgggcaatgtgttgactagatccctctgctggagacac
gagagcagagggacgttcagcgccagagacaccacagagaaagagacttccaacacacct
gtcaaatcagattattaa
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