Cyclopterus lumpus (lumpfish): 117745203
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Entry
117745203 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117745203
Membrane trafficking [BR:
clum04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117745203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Cep57_CLD
Motif
Other DBs
NCBI-GeneID:
117745203
NCBI-ProteinID:
XP_034409247
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All DBs
Position
16:6758882..6815369
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AA seq
1425 aa
AA seq
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MSEDVSEVPKELLESVRDAVGRKVKLSLRRRVKLEIKGDKTENRVLALASHRAYLLTARI
PTKVEHSLNYLEIQGIACNKPTQLFIEYERGSFSLKLLSTEEVNEVVAHIGNCLLRICPG
LQPSNVIKKLCMEPPDRLISLQTLWENNKPAEPGPCGGFSQMYRCVCDWLGLPYKEEVQW
DVDTIYLTQDTRELNLQDFSHLENRDLVAIIAVLEFNQWFTKLSTKDYKLSADVCEQILR
VVSRSSRLEELVLDNAGLKTDFAQKLAAALAHNPSSGLTTINLANNPLEDRGISSLGAQF
ARLRKGLKHLNFSKTSLSPKGVNSLCQSLSANPSIPSSLVHLDLSGNVLRDDMQHFYHFL
GQPNSLATLDLSNTDCSLDQVCSALLRGSVEHLSVLNVSKSVFPHRXKHTRGKEVPPSFK
HFFSSVMSLSSINVSGTKLPPEAVKALLLGLASNVNLKEVSLDLSCCELRSGGSQILEGC
IAEIPNISSLDISDNGLDTDLSTLLVWLAKNRSIRHLSLGKNFNNIKSKNLAPVLDSLVH
MIQEEESPLTSLSLADSRLKSDLTIVLNALGSNSSLTRLDISGNAMGDMGAKMLAKALQI
NSKLRTVIWDRNNTSPQGLQDVAAALEKNFTIRFMPIPIIDASQALKASPEKTEDALLKI
ESYLYRNHETRKYLQEQAYRLQQGIVTTTTQQMIDRICVKVQDHLNSLRNSETDAIMEDV
RSAENLIKDARNSKTLLPNLYHLGSAAREEVNSSAVGPIQEKLESMAGEVTNVMDQQLQT
LLESMVDAAESLCPHVMKRSSLRPELMKASSAKMVVPKSFVTKTLLEQSGVDIVNKISEV
KLSLASFLSDRIVDEILEALSTSQLTLADHLVRRGRPLVQQGSVDLDVPEEKIPKRASTE
LLEAERLEDLETCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEDVPIHVEDASTSS
QTPPTPSQVLPKLEHRTPAGMVELPSEEEKKLQHFTKLRPRRNKKKHSSKIPQINSAPSQ
DGEQNGLMGRVDEGVDEFFSTKVTRMDSKRSKSSESHDGEKKKSKGGFLNLIKRSSKSEK
ADKSDKSEKNLATPPVSGKSEKNQATNPASGTSSATVASTPTSIPEEPSSPKVAVKSPAH
EPKSRDNSSRSQPTDYSSSSDRSDELRTPDSMDEPWECSDGRGSPQGGRRYQGMQMMGSG
LLAEMKAKQERRAHKSSSPDRPESNATAAKPQPIISESRSPSGSINKSDPLTGSPEKSPP
RGETKPDRTPRLRATSSSSSPGGPVSPKPPVPQGAKPALAARPTILQKPRTSSTSKNIDE
SSDSPNSGGGSPKITVLPLTLKRTVSEKDKEGQTSLQSGGSTNKTTQDVRAGFVSDSVQR
PSRLRTNSEDHGFFKNKDPNPDKDKAAGKKSSDSGEEADKDFILI
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagacgtgtcagaggtccccaaagagcttctggagagcgtgagggatgcagtg
gggaggaaggtgaagctgtcactgaggaggagagtcaaactggagatcaaaggagacaag
acggagaacagagtcctggccctggcgtctcaccgagcttacctcttgacggcacgcatt
cccaccaaggtggaacattccttaaattatctggagatccaggggattgcttgtaacaag
ccgacacagctgttcatcgagtatgagcgtggctccttttctctgaagctgctctctaca
gaggaggtcaacgaggtggtcgctcacataggaaactgtctgctcaggatatgtcccggt
ctgcagcctagtaacgtgataaagaagctctgcatggagcccccagacaggctgatctct
ctgcagactctgtgggagaacaacaagcctgctgagcctggaccttgtggtgggttttct
cagatgtacagatgcgtctgtgactggttggggctgccttacaaagaagaggtgcaatgg
gatgtggacaccatctatttgacacaagacaccagagaactcaacctgcaggatttcagc
catctggagaacagggatctggtggcaataatagcagtgctggagtttaaccagtggttc
accaagctctccactaaggactacaaactgtctgcagacgtgtgtgagcagatccttcgg
gtagtgtctcgttccagtcgactggaagagctggttctcgacaacgcaggactcaaaacg
gattttgcccagaagctagctgctgccctggcccacaaccccagctcaggactcaccacc
attaatcttgccaataacccactggaggacagaggtatctcctccctgggtgctcagttt
gcccgacttcgtaaggggctcaagcatttaaacttctctaaaacctcactttcacccaaa
ggggtgaacagcctttgtcagtcactgagtgccaacccgtccatccccagcagcctggtc
catctggacctctcagggaatgtcctccgagacgacatgcagcatttttaccacttcctg
ggtcaacccaacagcctggcaacccttgacctctccaacactgactgctcattggaccag
gtttgctcagctctgctgcgaggctccgtcgaacacctctctgttcttaatgtgtcaaag
agcgtcttccctcacaggtaaaaacacactcgcggcaaagaggtgcctccatcctttaag
cacttcttcagcagcgtcatgtctctgagctccatcaacgtgtcaggaaccaagctgcca
ccagaggccgtcaaagccctcctgcttggcctggccagtaacgtcaacctgaaggaggtg
tctctcgatctcagctgctgtgagttgcggtcaggaggctctcagatccttgaaggttgt
attgccgagatcccgaacatctccagcctcgacatctctgacaacggcctggacacggac
ctgtccactctgctggtgtggttggccaagaaccgatccatcagacacctgtctctgggc
aagaacttcaacaacatcaaatccaaaaaccttgctccagtgttggacagcctggtccat
atgattcaggaagaggagtcgcccctcacctctctatctctagcagactccagactgaag
agtgatctgaccatcgttctgaacgccctcggcagcaactcctcgctcaccaggttagac
atcagtgggaacgccatgggagacatgggagccaagatgttggccaaagcgctacaaatc
aactccaaactcaggactgtgatctgggacaggaacaacaccagcccccagggacttcag
gatgtagcagccgctctggagaagaacttcaccattcgtttcatgcccattcccatcatc
gatgcctcccaggctctgaaggccagccctgagaaaactgaagacgccttgctaaagatt
gagagttatctgtacaggaaccatgaaacaaggaaataccttcaggaacaggcctatcgg
ctgcagcagggcatcgtgaccacaaccacacaacagatgattgacaggatttgcgtgaag
gtgcaggaccacctgaactctctcaggaactctgagacagacgccatcatggaggacgtc
aggtcagcagagaacctcatcaaagatgccagaaactctaaaacgctgctcccgaacctc
taccacctcgggtcagctgccagagaggaggtgaacagctcggcagtgggacccatccag
gagaaactggagtctatggctggggaggtgactaacgtcatggaccaacaactacagact
ctgttggagtcgatggtggacgcagcagagtctctgtgtccccacgtgatgaagaggagt
agtcttcgtccagagctaatgaaggccagctccgccaagatggtcgtacccaaaagcttt
gtcaccaaaaccctcctggagcagtcgggggtggatatcgtcaacaagatcagtgaggtg
aagctgagtctcgcgtctttcctgtcggatcgcattgttgacgagattctggaggctctt
tccacctcacaactcactctggcagaccacctggtgcggcgaggtcgccccttggtgcag
caggggtctgtggatctggacgtcccagaggaaaagattcctaaaagagcatcgaccgag
cttctggaggctgagaggctggaggatctagagacatgcatgatgactcctaaatccaag
aggaagagcatccacagcagaatgcttcggccagtgtctcgtgccttcgagatggagttt
gacctggacaaggccctggaagacgtccctatccatgtggaagatgcttcaacttcatct
caaactccacctactccatctcaggtcctgccaaaactggagcaccgaacgccagcaggg
atggtggagctgccgtctgaggaggagaaaaagctgcagcatttcaccaaactgcggccg
cgacggaacaagaaaaagcattccagcaaaatacctcaaatcaacagtgcgccatctcag
gatggggagcagaacggcctcatgggaagggtggacgagggtgtggacgagttcttctcg
acaaaagtcaccaggatggactccaaacgttccaagagttcagaatctcatgatggagag
aagaagaagagtaaaggaggattccttaacctcatcaaacgttcctccaaatcagaaaaa
gctgataaatcggataagtctgagaaaaatctggcaacccccccagtttcgggtaaatca
gagaaaaaccaggcaaccaatccagcttcaggtacatcctcagccactgtagcctcgacg
ccgacttccatccctgaggagccctcttcaccaaaggtggcagtaaagagcccagcccat
gagccaaagtccagagacaactccagccgctcccagccaacagactacagcagcagctca
gaccggtcagatgagctgaggacgccagactccatggacgagccctgggagtgctcggac
ggcaggggcagccctcagggaggcaggcggtaccaagggatgcaaatgatgggcagcggc
ctcctcgcagagatgaaggccaagcaggagaggagagcacacaagtcttccagccccgac
agacctgaaagcaatgcaacggcagccaagccccagcccatcatttcagaaagccgctct
cccagtggctcaattaataaatccgaccctctgactggttctccagagaaaagccctcct
cgtggcgagacgaagcctgaccgaacccctcgtctcagggctacttcctcctcgagttct
cctggggggccagtaagtcccaaaccaccggtgccacagggagcaaagcctgccctggct
gcccgacccaccatcctacagaagccaaggaccagcagcaccagcaagaacatagatgag
agctcagattccccaaacagtggtggtgggtctcctaagatcacagttcttcccctaacg
ctgaaaaggacggtgtcagagaaagacaaagagggccagaccagtctgcagtcaggaggc
tctacgaacaaaaccactcaggatgtgagggcggggtttgtgtcagactctgttcagcga
cccagccgtctccgtaccaactctgaggatcacggcttcttcaagaacaaggacccaaac
ccagacaaggacaaggcagcgggcaaaaagtcctcagactctggggaggaggcagacaaa
gactttattttaatataa
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