Cyclopterus lumpus (lumpfish): 117745230
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Entry
117745230 CDS
T09199
Symbol
tmc4
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117745230 (tmc4)
03037 Cilium and associated proteins [BR:
clum03037
]
117745230 (tmc4)
Transporters [BR:
clum02000
]
Other transporters
Pores ion channels [TC:
1
]
117745230 (tmc4)
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Stereociliary proteins
117745230 (tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117745230
NCBI-ProteinID:
XP_034409294
LinkDB
All DBs
Position
16:complement(11536795..11544490)
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AA seq
700 aa
AA seq
DB search
MYSEPQRPGSRQVDDYIEENGYPSDQQSLRLRRVSSRVSNQNYPQHDRSSTPAEENDSGS
SGPPRDLKAIPLPMALKRAVRQVQQMQVPVVSSRQSWRRKKNKSLQKLNENARGLLHFFT
LWRKTLQQIGGNFGGGVQSYFLFLRFLVVLNFVSFLLIAGFVLIPSIVVRSVGTSVVNST
GADECTVYDPNPQGLVVFYNYFLDLLLGTGFMEYSYMFYGYYNNTMVEDSDFSYNIPLAY
LFTAVFYFFFCLICIIARMGTAARVAVATGGSSVGNYSIIVFTGWDYGCQGGRATKLKQK
NVHYQLQVDLEEEIIKKKAAALTLCQKIVLYSLRVFMFFVSFGLIVAAFYGIFMATNFSQ
EMSGEEGILGLLLEYLPSIAITIGNFVVPLLCDQFTLIERYTPSTTVIVTLLRAVFLRLV
GLGVLLFTLWHQITCEGDTESEGCKLCQYNYEVYPCWETRVGQEMYKLTLFDLLINIGVL
VLVEFPRRMVVDNWSNKLAQWVGRQEFVVSANVLGLVYGQTIVWTGALFCPLLPLINTIK
FVLLFYIKKITLFSNCRPALKTFRSTTSTFFFLVVLLFGWGLATVVMVYSLAQIRPSMGC
GPFRFFPNMWSIVPTSFYSLSKITQDFLFFIGSQSFSIPLFALSCVGMCYFVALASVYGK
TVALLRAQLKLEGRDKQFLVKQIENLSRHQILKHTAGAHE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtgagccacagagaccaggctccagacaggtggatgactacattgaagagaat
ggttacccgagtgaccagcagtccctgaggttacgacgggtttcatctcgagtgtccaat
caaaactatcctcagcacgaccggagctcgacccctgcagaggagaatgactcgggaagc
agtggacctcctcgggacctgaaggccatcccgctgcccatggcactgaagagagctgtg
aggcaggtgcagcagatgcaggtgcctgtggtttccagcaggcagtcctggagacggaaa
aagaacaaatctctgcagaaactaaacgaaaacgccagaggattgctccactttttcaca
ctgtggagaaagactttgcaacagattggaggaaactttggcggtggcgtccagtcttac
ttcctgttcctgcgattcttggtggtgctcaattttgtttcctttttactgattgctgga
tttgtcctcatccccagcattgtcgtcagatctgttgggaccagcgttgttaacagcact
ggtgcagatgaatgcacggtttatgaccccaatcctcaaggcttggtcgtgttttataat
tacttcctggacttacttttgggaacgggtttcatggagtattcatacatgttttacggc
tactacaacaacacaatggtggaggacagcgacttctcctacaacatccccctggcctac
ctcttcactgccgtcttctactttttcttttgtctcatttgtatcattgcacgcatgggg
actgcagctcgggttgccgtggcaacgggaggcagctctgtgggcaactacagcattata
gtgttcaccggctgggactacggttgccagggaggccgagctaccaaactgaagcagaag
aacgttcactaccagctgcaggtggatctggaggaggagataataaagaaaaaggcagcc
gctctaactttgtgtcaaaaaatagttttatactctctacgcgtttttatgtttttcgtt
tcattcgggctcatcgtagcagccttctacggcatcttcatggccaccaacttcagccag
gaaatgagtggtgaggaagggatcttgggtctgttattagagtatctgccttccattgcc
atcaccattggaaacttcgtggtgccgctgctgtgtgaccagttcaccctgattgagcga
tacacccccagcaccactgtcatagtgacactattaagggcagtgttccttcgtctcgtg
ggtctgggtgtccttctcttcaccctgtggcatcagatcacctgcgagggggacaccgag
agtgaagggtgtaaactgtgccaatacaactacgaagtctacccgtgctgggaaacgcgt
gtggggcaggagatgtacaagctcaccctgtttgacctcctcatcaacatcggcgtgctc
gtgctggtggagtttccacgcaggatggtggtggacaactggtccaataagctggctcag
tgggtgggtcgacaggagtttgtagtttccgccaacgtgcttggactggtttatggtcag
actatcgtctggactggagctcttttttgccctctgctgccgctcatcaacaccatcaag
tttgtcctcctcttctacatcaagaagatcacactcttctctaattgtcggccagcactg
aagacgtttcgctccaccacctccaccttctttttcctggtggtactcctgtttggctgg
ggcttggccacagttgtcatggtttacagtcttgctcagatccgtccttctatgggttgt
ggccctttccgtttcttccccaacatgtggtcgattgttccaacatctttctacagcctc
tctaaaattacacaggactttctcttcttcatcggttcccagtcattctccatccccctg
tttgcgttatcttgtgtggggatgtgctatttcgtagccttggcatctgtttatgggaaa
accgttgccctgctaagagctcagcttaaactggagggccgcgacaagcagttcttggtg
aagcagattgagaatctgagtcgacatcagatactaaaacatactgcaggagcacatgag
tga
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