Cyclopterus lumpus (lumpfish): 117745242
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Entry
117745242 CDS
T09199
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117745242 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117745242 (prpf31)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117745242 (prpf31)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
117745242
NCBI-ProteinID:
XP_034409326
Ensembl:
ENSCLMG00005020702
UniProt:
A0A8C3AQ08
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Position
16:complement(11507407..11512305)
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AA seq
508 aa
AA seq
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MSLADELLADLEEAADEGDDGLYGEEEEGESDGEVTEGRPDGGLEDIPEEMEVDYSKAES
VSSIAKLRNSKPFSEIMDKISMYSGKQRKNSEVSGPVESDPEYRLIVAANNLTVEIDNEL
NIIYKFTRDKYSKRFPELESLVPDSLDYIRTVKEFGNNLEKCKTNETLQQILTNATIMVV
SVTASTTQGSLLTEDELKQLEESCDMALELNQSKHRIYEYVESKMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSASLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCALASRVDSFHESSVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGISSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEAKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggatgagctcctggccgatttggaggaggctgccgatgaaggggatgat
gggttgtatggagaggaagaggagggggaaagtgatggagaagttacagagggaaggcca
gatggagggctggaagacatcccagaggagatggaggtggactatagcaaagctgagagt
gtttcgtccatcgccaagctccgcaatagcaaaccgttttcagagattatggacaaaatc
tcaatgtatagtggaaagcagcgcaagaactcagaggtctccggtccagtcgagtctgac
ccagaatacagactgattgtggcagccaataacctcacagtggagatcgacaatgagctc
aatatcatttacaagttcactcgggacaagtactccaagaggttcccagagctcgagtct
ctggtgccagattctctagattacatccgcacagtcaaggaatttggaaacaatctggag
aaatgcaagaccaatgaaactctgcagcaaatcctcaccaatgccactattatggttgtc
agtgtcacagcctcgaccacacaggggtcacttctgactgaggatgaactgaagcaacta
gaggagtcctgtgacatggctcttgagctgaaccagtctaaacacaggatatatgaatat
gtagagtccaagatgtctttcattgccccaaatctatccatcattgttggagcgtcaaca
gctgccaagatcatgggtatcgctggcggcctcactaacctctcaaagatgcctgcatgt
aacctgatgctgctgggagctcagaggagaaccctgtctggttttagcagcgcctccctg
ctgccccacaccggctacatctaccactgtgatgttgtgcagtcgctaccacctgacctc
aggaggaaggcagctcgtctggtgtctgcaaaatgcgctctggcttcccgagtggacagt
ttccatgagagttcagttggcaaggttggctacgatctaaaagaagaaatagagaggaag
tttgataaatggcaggagcctccgccagtgaagcaggtcaaaccgctgccagcccctctg
gatggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtcttggc
ctgacggagatcaggaaacatgccaacagaatgacctttgcagagattgaagacgatgcg
tatcaagaggacctgggcttcagtctgggtcagctgggaaagagcggcagcggacgtgtc
aggcaggcccaagtcaatgaggccactaaagccagaatctccaaatccctacagaggacc
ttgcagaagcagagtatgacgtacggaggaaagtccacagtcagagaccgctcctcggga
atcagctccagtgtggcgttcactccgcttcaggggttggagatagtgaacccacaggct
gcagagaagaaggtggctgaagccaaccagaagtacttctctaacatggcggagttcctc
aaagtcaagaaagaagctaagatgtga
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