Cyclopterus lumpus (lumpfish): 117745266
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Entry
117745266 CDS
T09199
Symbol
ago1
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117745266 (ago1)
03036 Chromosome and associated proteins [BR:
clum03036
]
117745266 (ago1)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117745266 (ago1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117745266 (ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117745266 (ago1)
microRNA pathway
RISC loading complex
117745266 (ago1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
117745266
NCBI-ProteinID:
XP_034409369
Ensembl:
ENSCLMG00005011699
LinkDB
All DBs
Position
16:15691229..15706557
Genome browser
AA seq
858 aa
AA seq
DB search
MEPGPSGAEPMEDFPPPLQQVFHAPRRPGMGTVGKPIKLLANYFEVEIPKIDVHHYEVDI
KPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALPIGSEKVDFEVTIPG
EGKDRIFKVSIRWLAIVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTPVGRSF
FSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIR
NIDEQPKTLTDSQRVRFTKEIKGLKVEVTHCGQMRRKYRVCNVTRRPASHQTFPLQLESG
QTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQT
STMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDEMAEVTGRVLPAPILQYG
GRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDA
GMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLG
MATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHP
PAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKP
TRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKS
ERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQI
LTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHVSGQSNGRDPQA
LAKAVQIHHDTLRTMYFA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggaccgtctggcgctgagcccatggaggacttccccccacccctgcagcag
gtgttccatgccccccgtcggccaggcatgggtaccgtgggcaagcccatcaagctgctg
gccaactactttgaggtggagattccaaagattgacgtccatcactatgaggtggacatt
aagcccgacaagtgcccgcgtagagtcaacagggaggtggtggaatacatggtgcaacac
ttcaagccccaactctttggtgacaggaagccagtgtatgacggcaagaagaacatctac
acggtgctagcgcttcctattgggagtgagaaggtggattttgaggtaaccatcccaggt
gagggcaaagatcgaatcttcaaggtgtccatccgttggctggccatagtgtcatggcgc
ctgcttcaggagactctggtcagcggtcggctgcaggtcccccttgactcggtccaagct
ctggatgtggccatgcgccacctggcctctatgaggtacactccagtgggccgatcattt
ttctccccacctgaaggatactaccacccactgggtggggggagggaagtctggtttggc
ttccaccagtctgtgcgccccgccatgtggaagatgatgcttaacattgatgtgtctgcc
acggccttctacaaagcccagcctgtcatcgagttcatgtgtgaagttttggacatccgc
aatatcgacgagcagcccaagactctcacagactcgcaaagggtccgcttcaccaaggag
attaaaggcctgaaggtggaggtgactcactgtggccaaatgaggaggaagtatcgtgta
tgcaatgtcacccgacgacctgccagccaccaaacgtttcccctgcagctcgaaagtggg
cagacagtagaatgtacagtggcccagtacttcaagcagaagtacaacctgcagctaaaa
tacccccacctaccctgtctacaggtggggcaggagcagaagcacacctacctgcctctg
gaggtgtgtaacattgtagcaggtcagcgatgcatcaagaagctgacagataatcagacc
tccactatgatcaaagccacagctcgctccgcacccgacagacaagaggagatcagcagg
ctgatgaagaatgctaacttcaacctggacccgtacatccaggagtttgggatcaaggtg
aaagatgaaatggctgaggtgacgggcagggtgcttccagcccctatcctgcagtatgga
ggacggaatcgtgccatcgcaacccccaaccagggagtgtgggacatgaggggaaagcag
ttttataacggcatcgagatcaaagtgtgggcgattgcctgctttgccccccagaaacag
tgcagagaagaggtgctcaagaacttcacagaccagctgcgtaaaatctcaaaggatgct
gggatgccgattcaaggtcagccctgtttctgtaaatacgcccagggagcagacagcgtg
gagcccatgttcagacacctcaagaacacctactctggactgcagctcatcatcgtcatc
ctgccaggaaaaactcctgtctatgcggaggtaaagcgtgtgggagacaccctgctgggc
atggccacgcagtgcgtccaggtgaagaacgtggtgaagacgtcccctcagaccctctcc
aacctctgcctcaagatcaacgtgaagctgggaggcatcaacaacatcctggtgcctcac
caacggtcagcagtgttccagcagccggttatcttcctgggagcagacgtcacgcacccc
cctgctggagatggcaagaagccctccattactgctgtggtaggcagtatggatgctcat
cccagcagatactgtgccacagtgcgagtccagaggcccaggcaggagatcattgaagat
ttgtcgtacatggtgcgcgaactgttaattcagttctacaagtcgacccggttcaagccc
accaggatcattttctacagagatggagttcctgagggacagttgccacagattctccac
tacgagctcctggccatcagagatgcgtgcatcaagctggagaaagactatcagccaggc
atcacttacattgtggtgcagaaacgccaccacacacgcctcttttgtgctgacaagtct
gaaaggattgggaagagtgggaatattcctgcagggactacagtggacaccagcatcact
catccctttgagtttgacttctacctgtgcagccacgcgggcatacagggtaccagccgg
ccgtctcattactacgtcttatgggatgacaatcgtttcacggctgatgagttgcagatt
ctaacgtaccagttgtgccacacctacgtgcgctgtacccgctcagtctccatccccgcg
ccagcctactatgcccgtcttgtggccttccgtgcccgttaccatctggtggacaaagaa
catgacagtggagagggcagccatgtgtctggtcagagtaacggtcgggacccccaggcg
ctggccaaagctgttcagattcaccacgacaccctgaggaccatgtacttcgcctga
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