Cyclopterus lumpus (lumpfish): 117745366
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Entry
117745366 CDS
T09199
Symbol
ncam3
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
clum04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117745366 (ncam3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117745366 (ncam3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117745366 (ncam3)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117745366 (ncam3)
04090 CD molecules [BR:
clum04090
]
117745366 (ncam3)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117745366 (ncam3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117745366 (ncam3)
04091 Lectins [BR:
clum04091
]
117745366 (ncam3)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
117745366 (ncam3)
Cell adhesion molecules [BR:
clum04515
]
Immunoglobulin superfamily
NCAM1/2
117745366 (ncam3)
CD molecules [BR:
clum04090
]
Proteins
117745366 (ncam3)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117745366 (ncam3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Others
117745366 (ncam3)
Lectins [BR:
clum04091
]
I-type lectins (Siglecs)
117745366 (ncam3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_4
Ig_6
Ig_5
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
117745366
NCBI-ProteinID:
XP_034409539
Ensembl:
ENSCLMG00005002211
LinkDB
All DBs
Position
16:3872720..3879032
Genome browser
AA seq
702 aa
AA seq
DB search
MTKHPAVILKMASMLLLLLLLLLHGTEAKMDMITSKQDIQVGEDILLLCKAGGEGDIVWQ
KDGEDIDDEDKVSNIDESTSKLVIKKATRQDAGRYTCLCEFDNGHKDDIMTQLYVYEGPS
FGSTNTYHEFLEGTDVVMPCLVTGQPAVDVHWLRHREEISSNAEDRVRRLPDGTVHIKQV
KREDAGTYVCLAQIRGRPIKEELPVSVVVNAPTTTRLREEVKKVMAGPETNVSLLCLVDG
LPKPNITWMLPVAFDPSHHRFNSDRSQMTISSVARADYGEYVCTAANKISESSATFMLHV
YEAPEVFVSAEQQSVSVGERVSVSCNVSGHPQPELYWLNKHNGRTLDSSSGLVRAVDGAL
VIDEVVPSDGGTYSCMAVSTSGNASRDVAIHTQPGPPPDLSVSPGLTTVHFSLKSLPVSG
GTPITSFVLQWRQSAAEAWKEVTVPVSGPRSISSLRPYTPYTVRLAALNAVGVGQFSDQH
TVRTQGMRGEPDRPVLLSNEMKVEGNSFSVPLQPTDDGGTPLLHFDIRYKPDEEGTEWKE
MQLPPDADSVSLRDLSYGSDYQLEVSSINPNGSSAPAIFNFTIADQPVKSSRMTKGSVVA
VVMMIFLVIFLAVDATCCYRNRCGLLMSIAVKVFGRKVPGLQMLEEGEGTNGEVKLKSVS
TPRGSVQHSEAGLTKDGGPLTEITCDKAPLTKHKKNLHTATA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcacccagctgtcatcttaaagatggcctcgatgctgctgctgctgctgctg
ctgctgctgcacggcacagaagcgaagatggacatgattaccagtaagcaggacattcag
gtgggagaagatatcttactgttgtgtaaagctggaggagagggagacatagtgtggcag
aaggacggggaggacatcgacgatgaagacaaggtgtcaaacatcgacgagtcgacttct
aaattggtaattaagaaggccacgaggcaggacgcgggcagatatacctgcctgtgtgaa
ttcgacaacggacacaaagatgacattatgacacagctgtatgtttatgagggtccatca
tttgggagcaccaacacctaccatgagtttctggagggcacagacgtagtgatgccgtgc
ctggtgaccggccagccggccgtcgacgtccactggctcagacacagagaagaaatctcc
tcaaacgctgaagaccgcgtgcgtcgcctccccgacggcacggtgcacatcaaacaggtg
aagagggaggacgccgggacgtacgtgtgtctggctcagatcagagggaggcccatcaaa
gaggagctccccgtctccgtggtcgtcaacgctcccacgacgacgcgtctgagagaagag
gtgaagaaagtgatggccggaccggaaaccaacgtttccctgctgtgtttggtggacggt
ctacccaaacccaacatcacctggatgttgccggtggcgtttgacccttcgcatcatcgg
tttaactccgaccgcagccagatgaccataagctctgttgccagggccgactacggcgag
tacgtctgcaccgccgccaacaagatatctgagagcagcgccaccttcatgcttcacgtt
tacgaggccccagaggtgtttgtgtcagcggagcagcagagcgtctcagtgggagagaga
gtgtctgtgtcctgtaacgtctctggacatcctcagccggagctatactggctcaacaag
cacaatggacgcactctggactcgagctccggtcttgtccgtgctgtcgatggtgcgttg
gtgattgatgaggtagtgccctctgatggtggaacgtattcctgcatggctgtcagcacc
tctggaaatgcatcgagagacgttgcaatacacacccagcccggtccgcctcccgacctg
tcggtctcacctggactaaccacggtccacttctccctcaaatccctccccgtcagcgga
ggaacaccaatcaccagcttcgtcctgcagtggaggcaaagtgcagctgaagcgtggaag
gaggtcacagtcccggtttcaggtccccgatccatctcctccctccggccgtacacgccg
tacacggtgcgtctggctgccttgaatgcagtgggagtgggacagttctcagaccagcac
accgtccgcacccagggaatgcgaggtgaaccagaccgcccggttctgttgtccaacgag
atgaaagtagagggcaactccttctccgtccctcttcaaccgaccgatgatggtggaact
cctctgctgcactttgacatacgatacaaaccggatgaagaggggaccgagtggaaagag
atgcagctgccgcccgatgccgactctgtctcccttcgagatctgtcctacggctcagac
tatcaactggaagtgtcatccatcaacccgaacggttcctccgcccctgccattttcaac
ttcaccatcgcagatcagcctgtcaaatcgagccgcatgaccaaaggcagcgtggtcgcc
gtcgtcatgatgatcttcttggtgatcttcctggcggtcgacgccacctgctgctacaga
aaccgctgcggcctgctcatgtccatcgccgtgaaggtcttcggacggaaagtccccggc
ctccaaatgctggaagaaggagaaggaaccaacggagaagttaagctgaagagtgtgtcc
actccgagaggcagtgtgcaacattcggaagcgggactcactaaggacggggggccgctc
acagagatcacctgcgacaaagccccccttaccaaacacaagaaaaatctgcacaccgcc
accgcgtga
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