Cyclopterus lumpus (lumpfish): 117745376
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Entry
117745376 CDS
T09199
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117745376 (irx1a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117745376 (irx1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117745376
NCBI-ProteinID:
XP_034409551
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Position
16:complement(5667079..5671908)
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AA seq
498 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVSSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPASFAAHASQAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEGEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDRSTEG
SRDHRGGVGAGGDLDSLEKRRAFALQAHEAFDKSKSTISVHPGSKDNSDGNNNNTTRVLS
PDRVGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPGATTHSSAPHHQIQTHPAFL
PSHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHLQAQQQQQQQQQQPTS
VVVSPLAAAAALSNDSKAPPETHSPKHIEHENGVRSDSPPTQILKSSFRPIHDRSSLPSS
ARSPQDATQRVLTALSSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctcggctacccgcagtatttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccttcgtcccggggagggagcacagaaatcggggga
agcccgtccgccacagcagcggcggtgtcgtcggtgttgggcatgtacgccaacccgtac
gcgcacaactacagcgctttcttaccgtacaccagcgcggacttggctcttttctcacag
atgggatcccagtacgagctcaaggacagtccgggcgtccatccagccagcttcgcagcg
cacgcgtctcaggccttctacccttacggacagtttcagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccttgaaagcctggctcaatgagcacaggaag
aacccgtacccgaccaagggggagaagatcatgctggccatcatcaccaaaatgaccctg
acgcaggtctccacgtggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acatggggaagcaggagcaaagaggacggggaggacggcaacttgttcggcagcggcgac
gagggcgagaaaaacgaagacgaggaggagatcgatttggagagcatcgatatcgacaaa
atcgacgacaacgacggggatcagagcaacgaggacgacgacgacagatccacggagggc
agcagggaccacaggggcggtgtcggcgcggggggggacttggacagcttggagaagaga
cgggccttcgccctgcaggcccacgaggcctttgacaagtcgaagagcaccatttcggtt
cacccggggagtaaggacaactcggacggcaacaacaacaacaccacgcgggtgctttcc
ccggatcgagtcgggagctttcctctcccgtctaacaataagcccaaaatatggtcttta
gcagagaccgcgacgagccccgatagttcttctcagaaacccacgtccccttgtggcccg
ggggccaccacgcactcatcagccccccaccaccagatccagacccacccggccttcctc
cccagtcatggactgtacacttgccagattggaaagttccacaactggacaaatggggct
ttcctgggtcagaactccctcctcaacgtgaggtcgtttctgggagtaaaccagcaccat
caccaccaccacttgcaggcccagcagcagcagcagcagcagcagcagcagccgacatcc
gtggtggtgtcgccattagcagccgcagcagcactcagcaatgacagcaaggcccctcca
gagacacacagtcccaagcacatagaacatgaaaacggtgtcaggtcggattcacctcca
acacagattctgaagtcttcctttcgacccatccatgacagatcctctctgccttccagc
gccaggagcccgcaagacgccacgcaacgagtgctcacggctctctcctcggcttga
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