Cyclopterus lumpus (lumpfish): 117745379
Help
Entry
117745379 CDS
T09199
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117745379 (rbm12bb)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117745379 (rbm12bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117745379
NCBI-ProteinID:
XP_034409555
Ensembl:
ENSCLMG00005013861
UniProt:
A0A8C2ZK12
LinkDB
All DBs
Position
16:9368628..9373610
Genome browser
AA seq
640 aa
AA seq
DB search
MAVVIRLQGLKVTAGSEDIRKFFTGLTIPDGGVHIIGGERDEAFIIFASDEDARRAMIRS
GGCIKGSPVALLLSSKAEMQNVLEKSATNVEPDQKRRLEENARGARRSVDPEMGRRSASR
SDYSPLHHQRASNTNDFLHVFLKGMPFSVTEEEVRDFFCGLLIDEIVLLKNGNGTKNGKG
LVQFATKEDANESLKRDRGYIGSRYVEISTTTADDWRRVTGKVAMAVNTDDNFERDRSPV
RQQRNPHSVRSQSPFAPRPVPASDDEYCVLIENLSFTADKEDIKRLFRNAKLEDDQILYL
IGNDGRRTRSTFVLFKNLLDYCDALSPEKRQFLNRWIYTRPISREKMISLLDSQSTDVGP
SNTDVGPSGNSELQDRPPSYDSEKMCVFARNLPFDVQKVEIMDFFLGFNITEDKVSVLHD
HEGAGVGKALVLFRSEAEAMSALSLNGQRFLGSDVLLKCISRSQMRQLGVEPPLVQEPIV
QQPLQRDDRFSGRRSQASYHPGDTQYPDLRIPQGGNVPMANPHAHVYGGCDNEPYAVGPY
APQDRGNGVRGGFGPSVQHFDGPTCVKLLNLPFQIRSEEIYDFCYGFRIIPGSVSLQYDQ
SGKSKGTATAVFESRQEALTAVEELSGRPIGPRKIQLLLV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcatccgtttacagggactaaaggtcacagcaggttctgaggatattcgc
aagttcttcactggcctcacaattccagatggaggggtgcatataattggtggggagcga
gatgaagctttcattatctttgcttcggatgaagatgcaagaagagccatgatacggtca
ggaggttgcattaagggttcacctgttgcattgctactcagtagtaaagcagagatgcag
aacgtgcttgaaaaaagtgcaacaaatgtcgagccagatcaaaagaggcgacttgaggag
aatgcaagaggcgctagaagatctgtggaccctgagatgggcaggagatcagctagtaga
tcggattattcgccactccaccaccagagggcttcgaacactaatgactttttgcatgta
tttctaaaaggaatgccattttctgtgaccgaagaggaagtccgggactttttctgtggt
ttactaattgatgaaattgtcctattgaaaaatggaaatggtacaaaaaatgggaaaggt
ctggtccaatttgcaacaaaagaggatgcaaatgaatccctgaagagggataggggatac
attggctcgaggtatgtggagatttccacaacaacggcagacgattggcggagggttaca
ggtaaagtggcgatggctgtcaacacggatgataactttgaaagggaccgatcacctgtt
cgccagcaaaggaatccacattctgtgaggtcacaatcaccttttgctccgaggcccgtt
cctgcttctgacgatgagtactgcgttttgatcgaaaatttgtcatttacagctgataaa
gaagacataaaaaggctttttcgtaatgcaaagcttgaagatgaccagatcctctactta
attggcaatgatgggagaagaacgagatccacatttgtgctgttcaagaatctgcttgac
tactgtgacgctttatctcctgaaaaacggcagtttttgaaccgatggatttatacacgg
ccaatatcaagagagaaaatgatctcccttctggactctcagagcaccgatgtaggacct
tcaaacaccgatgtcggaccttctggaaactctgaacttcaggatcggcctccatcttat
gactctgagaaaatgtgtgtgtttgcgcggaacctaccatttgatgtccagaaagttgag
atcatggacttcttccttgggtttaatatcacagaggacaaggtgtctgtgctgcatgac
catgaaggtgctggagttgggaaggctttggttctcttccggtcggaggcagaggctatg
agtgcactctctctcaatggacagaggtttcttgggtcggatgtcctactcaaatgcatt
tcacgttctcagatgcggcagttgggtgttgagccgccactggtgcaagagccaattgtg
caacagccgctgcaaagagatgatagattctcaggcaggagaagccaggcatcctaccac
cccggtgacacacaatatcctgaccttaggattcctcagggtggtaatgtaccaatggct
aatccacatgctcacgtctatggaggctgtgataatgagccctatgcagtaggcccttac
gccccacaagacagaggtaatggtgttcgtggtggctttggtccctcagtgcagcatttt
gacggtcccacctgcgttaagctacttaacttaccatttcaaatcagaagtgaagaaatc
tatgacttttgctatggatttcgcattatccctggatctgtctcactccagtatgaccag
agtggaaaatcgaaaggcaccgcaactgcagtatttgagtcccgtcaggaggcgttaaca
gcagttgaggaactgagtggaagacccatcggtccaagaaaaatacagctattacttgtg
tga
DBGET
integrated database retrieval system
