Cyclopterus lumpus (lumpfish): 117745437
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Entry
117745437 CDS
T09199
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117745437 (nop2)
Enzymes [BR:
clum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117745437 (nop2)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117745437 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
PCMT
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
117745437
NCBI-ProteinID:
XP_034409656
Ensembl:
ENSCLMG00005001738
UniProt:
A0A8C2YXG9
LinkDB
All DBs
Position
16:12227352..12233110
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AA seq
762 aa
AA seq
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MGRKLDPTNTVKRGPGRKSRKQKGAETELAKFITDEEAAVPKRLSSRGRKRAAKRVQKSK
KPKAAAAEEEPKKGFTDENSQWLKPAKRKREGDEPESDDSDEHWEEEEEEEEQTKQTKKG
AKDQGKKSAKLGIKEVEEEEDDDDDEMVDDYGAVDDSSGEEAAAAEEDSDGEELLPIERA
AKKEKKKKETMAQESDDDDDDDDEEEDEDGGDKEKKSDADSDEEDTVQANMDEMDAFRLP
DAEECEKESIIPLDLKTIYQRIKDNVDVLCNFSTKREVGKERSEYISLLKKDLCTYYSYN
NFLIEKLMDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKW
SKVGLVIYDSSVPVGATPEYLSGQYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTY
IAQLMRNTGMIVANDANADRLKSVVGNVHRLGVTNTVICNYDGRQFPKVMSGFDRVLLDA
PCSGTGVIAKDPAVKTSKDEADIQRSAHLQKELILSAIDSVNAESSSGGYLVYCTCSIMV
EENEWVVDYALKKRNVKLVPIGLDFGKEGFTRFKERRFHPTLRLTRRFYPHSHNMDGFFV
AKFKKFSNVVPTATAGKEKDITDAPEATAVTGSPEEKPSKSDKKKKTVPGKAGDLKGKPQ
ANGTAAKKTANIKKKGKRDSPAGPKKAKIAKMDGETVQEAEAKKPAVKTADDTKASKAEK
KEGSRFEKKQGKNRKATTKANGRMGKNKFRKLKNMLRKKGGE
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtaagttggatcccaccaacacggtgaagagggggccagggagaaaatccagg
aagcagaaaggagcagagactgagttggccaagtttataactgatgaggaagcggcggta
ccaaaacgcctgtcaagtagaggcaggaaaagagctgcaaaaagagtccagaaatctaaa
aagcctaaagctgctgctgctgaggaagagcccaagaaaggtttcactgatgagaacagt
caatggttgaaaccagcaaagaggaagagagaaggtgatgaacctgaaagtgatgacagt
gatgagcattgggaggaggaggaggaggaggaggaacagacaaaacagacgaagaaggga
gcaaaggaccaaggaaagaagagtgccaaactaggaattaaagaagtggaggaggaggag
gatgatgatgatgatgaaatggttgacgactacggtgcagttgatgacagcagtggtgag
gaagcagcagcagcagaagaagacagtgatggagaggaacttcttccaattgagcgtgca
gccaagaaagaaaaaaaaaagaaggaaaccatggctcaagagagtgatgatgatgatgat
gacgacgatgaggaggaggatgaagatggtggtgataaggaaaagaaatcagatgctgac
tctgatgaggaagacacagtacaagccaacatggatgaaatggatgccttcaggctacct
gatgcagaggaatgtgagaaagaaagtatcattcccctggacctgaagacaatctatcaa
agaattaaggacaacgttgatgtcctctgtaatttttcaacaaaaagggaagtagggaaa
gaaagatcagagtacatctctcttctgaagaaggatctctgtacttattacagctacaac
aacttcctcattgagaaattaatggacctcttccctctctcagagctggttgatttcctt
gaggccaatgaaatccagagacctgtcactattcggaccaacacactgaaaacaaggagg
agggatcttgcccaggctctgatcaacagaggagtgaaccttgatcctcttgggaaatgg
tctaaagttggtttggtcatctatgactcctcagtacctgttggtgcaaccccagagtat
ctgtctggtcagtatatgctgcaaggggcctccagttttctgcctgtcatggcgctttct
ccacaagagggagagttggtgttggacatgagctcagctccaggaggcaagaccacctat
attgctcagctgatgagaaacaccgggatgatcgtggctaatgacgccaacgctgacaga
ttgaagagtgttgtgggcaacgtccaccgcctgggggtcaccaacaccgtcatctgcaac
tatgatggaaggcagttcccaaaggtgatgagtgggtttgacagagtgctgcttgatgct
ccgtgctcaggcacaggagtcatcgctaaagatccagctgtgaagaccagcaaggacgag
gccgacatccagcgatctgctcacttgcagaaagaactgattttgtctgccattgactct
gtcaatgctgagtcttcttcagggggatatctggtctactgcacatgttcaataatggtg
gaggagaacgaatgggtggtagactacgctttaaagaaaagaaatgtcaaattagttccc
attggacttgactttggcaaggaaggcttcaccaggttcaaagaacgtagattccatcct
actctgcgactgactcgccgattttaccctcattcccacaacatggatggattttttgtg
gccaagttcaagaaattctccaatgtagttccaactgcgactgcaggaaaagaaaaagac
attacagatgctcctgaggcgacagctgtgaccggctcccctgaagagaaaccatccaaa
agtgacaagaaaaagaagactgttcccggcaaggcaggtgacttaaagggaaaaccccaa
gccaatggaacagcagccaagaaaaccgcaaacatcaagaaaaaaggcaaaagggactca
cctgctgggccaaaaaaggctaagattgccaagatggatggagagactgtgcaagaggca
gaggccaagaagcctgcggtgaagacggctgacgacactaaagcatcaaaggctgaaaaa
aaggaggggagcagatttgagaaaaagcaaggcaaaaaccgaaaagcaaccacgaaggca
aatggcagaatgggaaagaataaattcagaaagttgaagaacatgttgaggaaaaaagga
ggagaatga
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