Cyclopterus lumpus (lumpfish): 117745457
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Entry
117745457 CDS
T09199
Symbol
pou2f2a
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117745457 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117745457 (pou2f2a)
03021 Transcription machinery [BR:
clum03021
]
117745457 (pou2f2a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117745457 (pou2f2a)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117745457 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117745457
NCBI-ProteinID:
XP_034409697
Ensembl:
ENSCLMG00005013873
LinkDB
All DBs
Position
16:12963838..12977717
Genome browser
AA seq
489 aa
AA seq
DB search
MTKTAAIAAKDFFSMWLPDIRMSKAVEVEKIGADSPLDGTDSERSGPESNHQAHSMKYNP
FPLSPTLSSSKNKMEECGEMSPALPLSHAPTPSQTALQHTQLMLTGSQLAGDIQQLLQLQ
QLVLVPGHSLSSSAQFLLPQAQQGQQGLLSPPNLISLPQQNQGSLLSASNRMGLQAHRDK
CMEVSGVTTVPSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFS
QTTISRFEALNLSFKNMCKLKPLLEKWLIDAETMSIDCTLPSPSSLSSSSMGFDGLPGRR
RKKRTSIETNVRVGLERAFMTNQKPTSEEILMIAEQLTMEKEVIRVWFCNRRQKEKRINP
SSATPPLPSQPPTAPPAHKPPCYSPHMMSSQLSQAVTSLSTTVTTMSPVCHQTSSLTSTH
PSLSSASSPVTPPPRSTASPATPSHSTLNLNTGLWRMGKKNGDVSNYITDFAANLSPSSQ
WWPAASFQS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacagcagcaatagcagcaaaggacttcttcagtatgtggttgccagatatc
aggatgtcaaaggctgtagaggtcgagaaaataggggctgactcaccgttggacggcaca
gattcagagcggagtgggcctgaatcaaatcaccaggctcactcaatgaaatacaatccc
tttcccctttcaccgaccctgagcagcagcaagaataagatggaggaatgtggtgagatg
tccccggctcttcctctctctcacgccccgaccccctcacagacggccctgcaacataca
cagctcatgctgaccggctcccaactagcaggggacatccagcagctgctgcagcttcag
cagttggtgttggtgcccggccactcgctctcgtcctctgcccagttcctcctcccacag
gcgcagcagggccagcaaggactcttatcgccaccaaatctcatttcgctacctcagcaa
aaccaagggagcctgctgtctgcttcaaatagaatgggactccaagcacatcgagataag
tgcatggaggtgagcggtgtgaccacggtgccctcagtgacctctcaccccgaggagccg
agtgacctggaggagctggaacagttcgcccgcactttcaaacagagacgcatcaaactg
ggattcacacagggagatgttggtttggccatggggaagctgtatggcaacgacttcagt
cagaccacgatctctcgctttgaagccctcaacctgagcttcaagaacatgtgcaagctg
aagccactgctggagaagtggctcattgatgcagagaccatgtccatagactgtaccttg
cccagccccagctccctgtcctcttcttctatgggctttgacgggcttcctggtcgccgc
cgaaagaagagaaccagcatcgagacgaatgtacgcgtgggcctggaacgcgcattcatg
acgaaccagaagcctacctcagaggagatcttaatgatcgcagagcagctcaccatggag
aaggaggtgatccgggtctggttctgcaaccgccgacagaaagaaaaacgcatcaatccc
tccagtgccacccctcccctgcccagccagcccccgactgccccaccagcgcacaaacca
ccctgctacagccctcacatgatgtccagccagctgtcgcaggccgtgaccagtctcagc
acaacagtgaccaccatgtcccccgtctgccaccagacttccagcctcacctccacccac
ccctctctcagctccgcatcctccccggtgactcctcctcctcgcagcacggccagccca
gccactcccagccacagcacactcaaccttaacacaggcttatggcgtatgggtaaaaag
aacggtgacgtgtctaactacatcaccgattttgctgcaaacttgagccctagcagccag
tggtggccagctgcctctttccagtcttga
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