KEGG   Cyclopterus lumpus (lumpfish): 117745495
Entry
117745495         CDS       T09199                                 
Symbol
cdc42l
Name
(RefSeq) cell division cycle 42, like
  KO
K04393  cell division control protein 42
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04010  MAPK signaling pathway
clum04144  Endocytosis
clum04370  VEGF signaling pathway
clum04510  Focal adhesion
clum04520  Adherens junction
clum04530  Tight junction
clum04810  Regulation of actin cytoskeleton
clum04912  GnRH signaling pathway
clum05100  Bacterial invasion of epithelial cells
clum05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117745495 (cdc42l)
   04370 VEGF signaling pathway
    117745495 (cdc42l)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117745495 (cdc42l)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117745495 (cdc42l)
   04520 Adherens junction
    117745495 (cdc42l)
   04530 Tight junction
    117745495 (cdc42l)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117745495 (cdc42l)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    117745495 (cdc42l)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117745495 (cdc42l)
   05100 Bacterial invasion of epithelial cells
    117745495 (cdc42l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117745495 (cdc42l)
   03036 Chromosome and associated proteins [BR:clum03036]
    117745495 (cdc42l)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117745495 (cdc42l)
   04031 GTP-binding proteins [BR:clum04031]
    117745495 (cdc42l)
Membrane trafficking [BR:clum04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    117745495 (cdc42l)
 Endocytosis
  Lipid raft mediated endocytosis
   GRAF1-dependent endocytosis
    117745495 (cdc42l)
  Macropinocytosis
   Ras GTPases
    117745495 (cdc42l)
Chromosome and associated proteins [BR:clum03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    117745495 (cdc42l)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   117745495 (cdc42l)
  Exosomal proteins of breast milk
   117745495 (cdc42l)
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    117745495 (cdc42l)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU
Other DBs
NCBI-GeneID: 117745495
NCBI-ProteinID: XP_034409768
Ensembl: ENSCLMG00005006422
UniProt: A0A8C2Z118
LinkDB
Position
16:complement(12456115..12460261)
AA seq 191 aa
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG
QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEISHHCPRTPFLLVGTQVDLR
EDSNTIEKLAKNKQRPLYIESGEKLARELKAVKYVECSALTQRGLKNVFDEAILAALEPP
EMKNKKRCVLL
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcagactataaaatgtgtagtggtaggtgacggtgcagtcggaaagacctgcttactg
atctcctacacaaccaacaagttcccttcagaatatgtgccgacggtttttgacaattat
gcagtgacggtgatgattgggggggagccctatacactcggcctatttgacacagcaggt
caggaggattatgaccggctgcgtcccctcagctatccacagacagatgtgttccttgtt
tgcttctccgtcgtctccccatcatcttttgaaaatgtcaaagaaaagtgggttcctgag
atttctcaccactgcccacgcacacccttcctgttagtgggcactcaggtggatcttcgg
gaagacagcaacacgatcgagaagctggcgaagaacaaacagcgccccctatatattgag
agcggagagaagcttgctcgtgagctgaaggctgtcaaatacgtggagtgctctgctctg
acacagcgaggacttaagaatgtgtttgacgaggccatcctggcagcactggagcctcct
gagatgaaaaacaaaaagaggtgtgtcctgctatag

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