KEGG   Cyclopterus lumpus (lumpfish): 117745513
Entry
117745513         CDS       T09199                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04068  FoxO signaling pathway
clum04136  Autophagy - other
clum04140  Autophagy - animal
clum04621  NOD-like receptor signaling pathway
clum04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    117745513 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    117745513 (atg12)
   04136 Autophagy - other
    117745513 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    117745513 (atg12)
   04622 RIG-I-like receptor signaling pathway
    117745513 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117745513 (atg12)
   04121 Ubiquitin system [BR:clum04121]
    117745513 (atg12)
   03029 Mitochondrial biogenesis [BR:clum03029]
    117745513 (atg12)
Membrane trafficking [BR:clum04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    117745513 (atg12)
Ubiquitin system [BR:clum04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   117745513 (atg12)
Mitochondrial biogenesis [BR:clum03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    117745513 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 117745513
NCBI-ProteinID: XP_034409796
Ensembl: ENSCLMG00005021145
UniProt: A0A8C3AS51
LinkDB
Position
16:complement(11929117..11931946)
AA seq 119 aa
MKMSDNAESPIETQKEESQPPSDESTTTDDKKKIDVLLKAVGNTPIMKTKKWAVERGRTI
QSLSQFISRFLKLDGSEQLFIYVNQSFAPSPDQDVGVLFDCFGSDGKLILHYCKSQAWG
NT seq 360 nt   +upstreamnt  +downstreamnt
atgaagatgtctgacaacgcagagtccccaatagaaacgcaaaaagaggagtcacaaccg
ccttcggacgagtcgacgacaactgatgataagaaaaaaattgatgtgctgctgaaggca
gtaggaaacactcctataatgaaaacaaagaagtgggccgtggaaagggggaggacgata
cagtccctgtctcagttcatctctcgtttcctcaagcttgatggcagtgaacaattgttc
atttatgttaaccagtcatttgccccctcaccggatcaagacgtaggggtcctttttgat
tgttttggcagtgatggaaagctcattctgcattactgtaaatctcaagcctggggttaa

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