Cyclopterus lumpus (lumpfish): 117745555
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Entry
117745555 CDS
T09199
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117745555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117745555
Enzymes [BR:
clum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117745555
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117745555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
UreF
DUF4774
UL141
Glutaminase
Zf-C2H2_ZNF451_2nd
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117745555
NCBI-ProteinID:
XP_034409851
Ensembl:
ENSCLMG00005011045
UniProt:
A0A8C2XTX3
LinkDB
All DBs
Position
16:complement(9165814..9167452)
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AA seq
412 aa
AA seq
DB search
MAKSPGSPSRGNLSPEGIVREIQINLLECKVCFEKFSTQQKERKPQNLSCGHVLCLECIR
ALSHPLLRKLECPFCRQLCSVDSTSHCQALSDLQELLLSQTPPSSTHRASAGLGLATSLT
STALHLCTAFGGWGSLINPTGIAVSGLSGTIVVVHDGEERLAVFSPQGTKLHSFGRRGQG
SGEICFPVDVAVTPCGHVVVTDAGDKAVKVFSSMGNHVLTVKDSLQMPWGVDTNSLGHIL
VSDIQVGTLSQVKVDYSHGLALENQTVIADLQHPKAVACCRVTGNTAVMEHLPDDTPSPG
RNQHTRLRVFTEDFHLLYQTDSFSLTLQFTVRLNMSGVAFDRDGDVIVIDSIQGMIWSLG
KLLKGPAPTPLVGDHLINPVGLVSLNDTLVILDSGDHAVKIYSAKSDAGPMI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctaagagtcctggttccccgagtcgtggcaacctgagccctgaggggattgtgagg
gagatccagatcaacttgctggagtgtaaagtctgcttcgagaagttcagcactcagcag
aaggagcgcaaaccacagaacctttcctgtggccatgtactctgtctggaatgcatcagg
gctctgtcccaccctctcctgaggaagctggagtgccccttttgtcgacagttgtgcagc
gttgacagcacttcccactgccaggctcttagtgacctgcaggagctgctgttgtcccaa
actcccccatcttctactcacagggcaagcgcaggtcttggcttggccacaagtctgaca
tccacagctctgcacctctgcacagcctttggagggtggggcagtcttatcaatcccact
ggcattgccgtttcgggattgtcagggacgatagtggtggtgcatgatggagaggagagg
ttggcggtgttcagtccacagggcacgaagctgcacagttttgggagaagaggacaaggc
agtggggagatctgcttcccagtggacgtggcggtgactccctgtggtcacgtggtggtt
actgatgcaggggataaagctgtgaaggtgttctcctccatgggtaaccatgttttgact
gtcaaagattccctccagatgccctggggtgtggacacaaacagcttggggcacatcctg
gtctcagacatccaggtcggcacgctgtcccaggtaaaagtggactattctcacggtctc
gctctagagaatcaaacagtcattgcagacctgcagcatccaaaagcggtggcctgctgc
cgggtgactgggaacactgcagtgatggagcatttacctgatgacacgccttcaccaggg
aggaaccaacacacaaggctgagagtgtttacagaagacttccacctcctctatcagact
gacagtttcagcctgaccctgcagttcacagtgaggctcaacatgtcgggcgtggccttt
gacagagatggagatgtgattgtgattgactccattcaggggatgatttggagtttgggg
aagctcctgaaaggcccagccccgaccccacttgtgggagaccacctcatcaacccagtt
ggacttgtgtcgctgaacgacaccctcgtcattctggacagtggagaccatgcagtgaag
atttactctgctaaatctgatgctgggcccatgatatag
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