Cyclopterus lumpus (lumpfish): 117745556
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Entry
117745556 CDS
T09199
Symbol
rusc1
Name
(RefSeq) LOW QUALITY PROTEIN: RUN and SH3 domain-containing protein 1
KO
K23283
RUN and SH3 domain-containing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117745556 (rusc1)
Membrane trafficking [BR:
clum04131
]
SNARE
SNARE associated proteins
Others
117745556 (rusc1)
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Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
117745556
NCBI-ProteinID:
XP_034409852
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Position
16:11002790..11013740
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AA seq
898 aa
AA seq
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MLAGLTQAELLKLSPELGVCVGGLEDEVDGDHVISSRSGELHEFRLKDRNEMKECDTELM
ARDRWRSRGKMDGDRRADIAEDDKRNEESTQRTTSFTEMARIRKRSSGLTSDPYYSTGFS
NTQETKTKNMSFESFHYPAEVLDSPPPPPPPRPLPPIPPSVPHHEISTLQANSAQPERFD
WLIAFTPDSDARPQHPPLTVRKSHLENQKKLSSSGSSTGLAPKVTTFKEMRYRNKSTFLP
TKVITDPDPDPTVITPDADILYNLRWRREMAGGDGNQWEYTSQAQAFFMQPPPALTSMAA
LKEMLQRADEEGRQPELCPSQKIGCSVSDSSLWTIGREWEGEKVKKDEKEGKEEEEEKVE
KVEVEVRGRADGGRTLETRTTAVRSVSFAGSVQRTETSWMGEDVKHPMRALVNAVSVAVE
AILAQFSSSRTIVQKALSGDSSINPSLGRLVLQCLCPALHSLLTDGLKPHQSDLIAGRRP
NSAWGLVQASTRPGPKTQALFNLQVCVGELPQLRQSKHRFNAFLLGLLNTKLLDFWLSHL
QSCSDVLETYYRPSSFMLLSLTAFQPLFEELLLVLQPLSLLTFNLDLLFQHHHLEPDIHT
PEXPSTTCQDAGFQQSTEGAKSKTTSCRYIESLSGVDFGSPEYRAAKTLSALSNLQNGVP
GSQTIALLDPXKASVTQTSPQLLWGAGEGYWRLPLPNVEEDSLTQQAGQVIQQGWGAVMR
WGGRLSQNLSELTXKRRRXKDDLSDLQAQAGSDFAPVSSGAPVPWGLGRLFGASKSLSSP
PSHTPATRRPSQWLAPGVTALTRMVSSNSTPIIRRGPEPRAKVSQSQRRRLTHLEMMDKP
RPLRSVRTLCDHSGAGSELSFCKGEELVVLGGVDQDWIRCRQGDKEGLVPIGYTSLIM
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctggattgactcaagctgagctcctcaaactcagcccagaacttggtgtgtgt
gttggagggttagaggatgaggttgatggagatcacgttatctcgtccaggtctggggag
ctacatgagttcagactaaaagatcggaatgagatgaaggaatgtgacacagagttgatg
gctagagatagatggagaagccgaggcaagatggatggagatcgaagagcagatatagct
gaagatgacaaaaggaacgaggagagcacacaaagaaccacctcttttactgagatggca
aggataaggaagaggagcagcggtctgacctccgacccttactacagcactggttttagc
aatacacaagaaaccaaaacaaagaatatgagctttgagtctttccactatcctgctgaa
gtactagattcacctcccccccctccccctcctcgtcccttacccccaatccctccatct
gtgccacaccacgaaatcagcactctccaggctaactctgcacagcctgagcgatttgat
tggctcatagcattcacacctgactctgacgcccgaccacagcatccacccctgacagtg
agaaaatctcatttagaaaatcaaaagaagctcagttcttcagggtcatcaacggggtta
gcgccaaaggtcacgacctttaaagagatgcgataccgcaacaagagcaccttcctccca
acaaaggtgatcaccgatccagaccctgacccaacagttattactccagatgcagatata
ctgtacaacctgaggtggagaagagagatggcaggcggcgatggcaaccaatgggagtac
acctctcaggctcaggctttctttatgcagccgccaccagctctcacctcaatggccgct
ctaaaggaaatgctccagagagccgacgaggagggtagacaaccggagctgtgcccatca
cagaagattggctgctcagtcagcgacagcagcctgtggaccatcggcagagaatgggag
ggtgaaaaagttaagaaggatgaaaaggaagggaaagaagaagaggaggagaaggtggag
aaggtggaggtggaggtgagaggacgagccgatggcggaaggactcttgaaacaagaact
acagctgttcgcagtgtctcatttgctggctctgttcagaggacagagacatcctggatg
ggcgaagatgtgaagcatccaatgagagctctggtcaatgcggtcagcgtggcagtggaa
gccatcttggcccagttcagctcttctcggactatcgttcagaaggccttatcaggagac
agcagtataaatccatctctgggccgcctggtgctgcagtgtctctgccccgccctgcac
agcttgctgaccgatggcttgaaacctcaccagagtgacctgattgcaggcaggaggcca
aattcagcctggggtctggtccaggcctcaaccaggccaggtcctaaaactcaagcgttg
ttcaacctacaagtgtgtgttggagagcttcctcagctcagacagagcaaacacaggttc
aacgcattcctcctcggtctactgaataccaagcttcttgatttctggctgtctcacctt
cagtcttgcagtgatgtgctagagacgtattaccgcccctcctcctttatgcttctgtcg
ctgaccgccttccagcctctgttcgaggagctgctcctcgtgttgcagcctctaagcctg
ctgaccttcaacctcgacctgctcttccagcaccaccatttagagccagacattcacact
ccagaantccccagtacaacttgtcaggatgctggattccagcagtcaacagagggggca
aaatccaaaactacaagctgcagatatattgaaagcctctcaggagtagactttggaagc
ccagaatatcgggcagccaagacattgtcagcattgagtaatctgcagaacggagtacca
gggagtcaaaccatagcactgctggacccataaaaggcttcggtcactcagacaagtcct
cagctgttgtggggtgcaggagaaggatattggagacttcctcttcctaatgttgaggag
gacagcctcactcagcaggcaggacaggtgatccagcagggatggggggctgtgatgcgc
tggggaggcagactgagccagaacctgtcagagctaacctgaaaaaggaggaggnntaaa
gatgatctgtcggacctccaggcccaagcagggagcgactttgctccagtcagcagtggt
gctccggttccttggggtttggggaggctcttcggagcctctaaaagcctcagcagccca
ccaagtcacacaccagcaaccaggcgtccgtctcagtggctggcccctggtgtcactgca
ctgacacgaatggtgagcagcaactccactccgataataaggcggggccctgagccgagg
gcgaaagtgagccagagtcagagaaggaggttgacacacctggagatgatggacaaaccc
agaccactcaggtctgtacgaacgctgtgtgaccactctggagcaggttcggagctgagc
ttctgcaaaggggaggaactggtggtgttgggaggagtcgatcaggactggattcgctgt
cgtcagggagacaaagagggactggtacctattggctacacctccctcatcatgtga
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