KEGG   Cyclopterus lumpus (lumpfish): 117745559
Entry
117745559         CDS       T09199                                 
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clum03019]
    117745559
Messenger RNA biogenesis [BR:clum03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     117745559
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH zf-CCCH_2 UBA_N4BP1_C zf-CCCH_4
Other DBs
NCBI-GeneID: 117745559
NCBI-ProteinID: XP_034409856
Ensembl: ENSCLMG00005008781
LinkDB
Position
16:complement(14273210..14280132)
AA seq 647 aa
MNITQRPCNKYSMLLIRGPYAPGMDQALPSQSSVLDQLEPDSEELQLRVDFFRKLGYPSS
EAKAALRKLGLSTDTNSVLEELVLSRTGVAPCMSSSDGDEISTGQKDPLLPPSWALGTCR
TNLQHGDRKNTDTELRPIVIDGSNVAMSHGNKEVFSCRGIQLAVNFFLDRGHNTITVFVP
TWRKEQPRPDGPITDQHILTELEKRKIVVFTPSRRVGGKRVVCYDDRFIVKVAYESDGVI
VSNDTYRDLQGERPEWKKCIEERLLMFSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLPTE
QKRQLCPYDKKCTYGIKCKFYHPERSNQSYLSLADELREKAQISTVKEQRNARVSPRQLQ
SDPGPALDAFPHPKDSNTEHTRDQQSYSHPSQVCKNTLYWEDPRKSQNHMPCPVTGGQGQ
KEWPGLHSMPNHYYANVSHDYLDSGLGSYESQYSDYSHCLNHSHSLRPQQQSALAGPRHA
QNNTSQSCRCCSHIVPAQQQHHGDQGTKGQPKYDTYPPHMFPASVPHQNSLRSHLPYSGA
PHHQQHYWSDPFQGLPQARTSCVLPSSVHSSHPHNCSYKGQQHHFSGQQQSSSAAYDPQT
LELRKKLQAIFNPQQVDRVMEMFPHVMNAEKLAAEILNLKAQRGIFG
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgaatatcacccagaggccgtgtaacaagtattctatgctgctgataagaggcccatat
gctccaggaatggatcaggcacttccaagccagagctcagtgttggaccagcttgaaccg
gacagcgaggagctccagctcagagtggacttcttcaggaaactgggttacccctcatca
gaggcgaaagctgctctgaggaagctgggcctgagcacagacaccaactctgtgctggaa
gagctggttctgagcaggaccggagttgcaccctgcatgtccagttctgatggtgatgag
attagcacgggccaaaaggacccactgctgcctcccagttgggcccttggaacctgcaga
accaatctacaacatggggaccggaagaacacagacacagaattgaggcccattgttatt
gacggcagcaatgttgcaatgagccacggcaacaaggaagtgttctcatgtcgcggcatc
caacttgcagtaaacttctttctggacagaggtcacaatactattacagtgtttgttccc
acttggcgcaaagagcagcccagacctgacggccccataacagatcaacacatcctgact
gagcttgaaaaacggaaaatagtggtcttcactccatcgcgccgagttggtggcaagcga
gtggtttgctatgatgatcgcttcattgtcaaggtggcgtatgagtcagatggagtaatt
gtatccaatgacacataccgcgacctccaaggagaaagacctgagtggaagaaatgcatc
gaggagaggctcctcatgttctcctttgtgaatgacaaattcatgcccccagatgaccct
ctgggtcgccatggacccagtcttgacaacttccttcggaaaaagccgctgcctacagag
caaaagagacagctgtgtccttatgacaaaaagtgtacttacggtatcaaatgtaagttc
taccacccagagcggtcaaaccagtcctacctgtcattggctgatgaattgagagaaaaa
gcccagatttctactgtaaaagaacaaaggaatgccagagtatcacccaggcaacttcag
tctgatcctgggccggctcttgatgcatttccccatcctaaagactcaaacacagagcac
acaagagaccagcaaagttactcacatcccagtcaggtttgcaaaaatacactgtactgg
gaggatcctagaaaaagtcaaaatcatatgccctgtcctgtaacaggaggccagggtcag
aaagagtggcccgggctgcactccatgccaaatcattactatgccaacgtctctcacgat
tacctggattctggccttggctcttatgagagtcagtactctgactattcgcattgcctc
aaccactcccacagcctcaggcctcagcagcaaagtgccttggctgggcccagacatgct
caaaacaacaccagccagtcttgcaggtgctgttcccacatagtgccagctcagcagcaa
caccatggagaccagggcaccaagggtcaacccaaatacgacacttaccctcctcacatg
ttcccggccagtgtgccacaccaaaacagcctccggagccatctcccttacagtggagcc
ccacatcatcagcaacattactggtcggatccctttcaggggctgccccaagccaggaca
tcatgtgttctcccctcttcggtccattcatcacaccctcacaactgctcttacaaaggc
caacagcaccacttctcgggccaacaacagtcgtcctctgctgcgtacgacccacaaacg
ttggaactccgcaagaagctgcaagccatcttcaacccgcagcaggtggatagagtcatg
gaaatgtttccacatgtgatgaatgcggagaaactggctgcagagatcctcaacctgaag
gctcagagaggtatattcggataa

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